Gene Pmen_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1488 
Symbol 
ID5108439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1648601 
End bp1648762 
Gene Length162 bp 
Protein Length53 aa 
Translation table11 
GC content57% 
IMG OID640502717 
Producthypothetical protein 
Protein accessionYP_001186985 
Protein GI146306520 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000724258 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATG ACGACAAGCT GATCGATTTC GCCGCCGAGC GCGACAAGCG TATCCACGAC 
CTCAACGACA AGCGCCTCAA CGAGATGCGC CAGGCGTTCG AGCAGGTGCT GCCGCTGGGC
AAGGCCAAGA AGAAGTCGAA GAACAAACCG AAGAAGCGCT GA
 
Protein sequence
MSNDDKLIDF AAERDKRIHD LNDKRLNEMR QAFEQVLPLG KAKKKSKNKP KKR