9 homologs were found in PanDaTox collection
for query gene Pmen_1488 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009439  Pmen_1488  hypothetical protein  100 
 
 		 53 aa  105  3e-22  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.000724258  normal  1 
 
 
-
 
NC_007492  Pfl01_1260  hypothetical protein  75 
 
 		 53 aa  66.2  0.0000000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007005  Psyr_3840  hypothetical protein  75 
 
 		 52 aa  65.1  0.0000000003  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_1816  hypothetical protein  71.79 
 
 		 53 aa  62.8  0.000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_010501  PputW619_1165  hypothetical protein  75 
 
 		 53 aa  59.3  0.00000002  Pseudomonas putida W619  Bacteria  normal  0.451895  normal  0.0138093 
 
 
-
 
NC_002947  PP_1148  hypothetical protein  71.05 
 
 		 64 aa  58.2  0.00000004  Pseudomonas putida KT2440  Bacteria  normal  0.662745  normal  0.191411 
 
 
-
 
NC_009512  Pput_1182  hypothetical protein  71.05 
 
 		 53 aa  58.2  0.00000004  Pseudomonas putida F1  Bacteria  normal  0.372943  normal  0.343336 
 
 
-
 
NC_010322  PputGB1_4269  hypothetical protein  71.05 
 
 		 53 aa  58.2  0.00000004  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012560  Avin_30260  hypothetical protein  69.44 
 
 		 55 aa  56.2  0.0000002  Azotobacter vinelandii DJ  Bacteria  normal  0.309415  n/a   
 
 
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