Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1447 |
Symbol | |
ID | 5109736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1609289 |
End bp | 1610194 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640502676 |
Product | hypothetical protein |
Protein accession | YP_001186944 |
Protein GI | 146306479 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.23861 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGGTA GGGGCAGTGC GCTGGCGATG GCCGCGCTGG TACTGGCGAT GGCGCTGTGG GGCAGCTCCT TCATCGCGCT CAAGCTGGCG TTCGCCGAAT TGCCGGCATT GTGGGTGATC GCCGGGCGCA TGCTGCTCGG TGCGCTGGTG TTTCTCGCCG CCTGGCGCTG GCGCGGGCGT GTCGACTACC GCCGGGGTGA CTGGAAATAC CTGCTGGCGC TGACGGCCTG CGAACCCTGT CTGTACTTCA TCTTCGAGGC TCTGGCGCTG CAGCACACCA GCGCCTCGCA GGCCGGCATG ATCACTGCGC TGCTGCCCCT GCTGGTGGCC CTTGGCGCCT ATCTGTTCCT CCACGAGCGT CTCACTCGCA CCACCCTGGC CGGCTTTGCC CTGGCACTCG GCGGCGCGCT CTGGCTGAGC CTGGCCGGCA GCGCCGACGA GCATGCGCCC AATCCCTTGC TGGGCAACTT CTTCGAGCTG CTGGCGATTC TCTGCGCCAC CGCCTATACG CTGCTACTCA AGCACCTGAC GGGGCGCTAT TCGCCCTTCA TTCTGACCGC GCTGCAGGCG TTGGTCGGCT CGCTGTTCTT CGTGCCGCTG GCGGCGTGGC AGGCCGACTG GCCGAGCAGC TTCAGCCCCC AGGGGCTGGC GGCCGTGGCC TACCTCGGCG TGGTGGTGAC GGTGGGCGCC TATGGCCTGT TCAATTTCGG CGTCAGTCGT CTGCCGGCCA GCCAGGCCAC GGCCTTCACC AACCTGATCC CGCTGTTCAC CCTGGTGTTC GCCGCCGTGC TGCTGGGCGA GCGCTTGAGC GCTGAGCAGA TGGTGGCGGC GGGGCTGGTG TTCGTCGGGG TATTGCTCAG CCAATGGCGC AGCCGCGCGC CGCTGCCGGC CGGTGTGCTG GATTGA
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Protein sequence | MQGRGSALAM AALVLAMALW GSSFIALKLA FAELPALWVI AGRMLLGALV FLAAWRWRGR VDYRRGDWKY LLALTACEPC LYFIFEALAL QHTSASQAGM ITALLPLLVA LGAYLFLHER LTRTTLAGFA LALGGALWLS LAGSADEHAP NPLLGNFFEL LAILCATAYT LLLKHLTGRY SPFILTALQA LVGSLFFVPL AAWQADWPSS FSPQGLAAVA YLGVVVTVGA YGLFNFGVSR LPASQATAFT NLIPLFTLVF AAVLLGERLS AEQMVAAGLV FVGVLLSQWR SRAPLPAGVL D
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