| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1383 |
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| Symbol | |
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| ID | 5109436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1548527 |
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| End bp | 1549228 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502612 |
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| Product | ABC transporter related |
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| Protein accession | YP_001186880 |
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| Protein GI | 146306415 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.334561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.312332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGAGCT TCAACAACGT CTCAACCTTC TACGGCAAGA TCCAGGCGCT GCACGATGTC
AGCATCGAAG TGCAGAAAGG CGAGATCGTC ACCCTGATCG GCGCCAACGG CGCCGGCAAG
TCGACCCTGC TGATGACCCT GTGCGGCAAC CCGCGCGCCA CCAGCGGCAG CATCCGTTAC
CTGGGTGAAG AGCTGGTGGG CATGGATACC CCGGAGATCA TGCGCAAGAG CATCGCCATC
GTGCCGGAAG GCCGTCGCGT GTTCGCCCGC CTGACCGTCG AGGAAAACCT GGCCATGGGC
GGCTTCTTCG GCGACAAGGC GGAGAATCAG GCGCAACTGG ACAAGGTCCT GCACCTGTTC
CCGCGCCTGA AGGAGCGCTT CGCCCAGCGT GCCGGCACCA TGAGCGGTGG CGAGCAGCAG
ATGCTCGCCA TCGGCCGTGC CCTGATGAGC AAGCCCAACC TGCTGCTGCT CGACGAGCCG
TCGCTGGGTC TGGCGCCGAT CATCATCCAG CAGATCTTCG ACATCATCGA GCAACTGCGC
AAAGACGGCG TGACCATCTT CCTGGTCGAG CAGAACGCCA ACCAGGCGCT GAAGCTGGCC
GATCGCGGCT ATGTGCTGGA GAACGGTCAC ATCGTCATGC AAGGTAGCGG CGAAGAGCTG
CTCAACGACC CGAAGGTACG CGACGCCTAC CTCGGTGGCT GA
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| Protein sequence | MLSFNNVSTF YGKIQALHDV SIEVQKGEIV TLIGANGAGK STLLMTLCGN PRATSGSIRY
LGEELVGMDT PEIMRKSIAI VPEGRRVFAR LTVEENLAMG GFFGDKAENQ AQLDKVLHLF
PRLKERFAQR AGTMSGGEQQ MLAIGRALMS KPNLLLLDEP SLGLAPIIIQ QIFDIIEQLR
KDGVTIFLVE QNANQALKLA DRGYVLENGH IVMQGSGEEL LNDPKVRDAY LGG
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