Gene Pmen_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1374 
Symbol 
ID5109427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1539333 
End bp1540151 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content69% 
IMG OID640502603 
Productenoyl-CoA hydratase 
Protein accessionYP_001186871 
Protein GI146306406 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0833135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0914485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACCG CACTGGAAAC CTACAAATCC GGCATCTTCG ACCTGACCCA CAAGCTGACC 
GTGGAAAAGC ACGGCCATAC CGCGCTGATC ACCATCAACC ATCCGCCGGC CAACACCTGG
GACCGCGACT CGCTGATCGG CCTCAAGCAG GTGGTCGAGC ACCTCAACCG TGACGACGAG
GTCTACGCCC TGGTGGTGAC CGGCCAGGGA CCGAAGTTCT TCTCCGCCGG CGCCGACCTG
AACATGTTCG CCGACGGCGA CAAGGCGCGC GCCCGCGAGA TGGCCCGACG CTTCGGCGAA
GCCTTCGAGA CCCTGCGCGA TTTCCGCGGC GTGTCCATCG CCGCGATCAA CGGCTACGCC
ATGGGCGGCG GCCTGGAATG CGCCCTGGCC TGCGACATCC GCATCGCCGA ACGCCAGGCG
CAGATGGCCC TGCCGGAAGC GGCCGTGGGC CTGCTGCCGT GCGCCGGCGG CACCCAGGCG
CTCCCCTGGC TGGTGGGTGA AGGCTGGGCC AAGCGCATGA TCCTCTGTGG CGAGCGTATC
GACGCCGAAA CCGCCCTGCG CATCGGCCTG GTCGAGCAGG TGGTGGATAC CGGCGAGGCG
CGCGGCAGCG CCCTGCTGCT GGCCGCCAAG GTGGCGCGGC AGAGCCCGGT GGCGGTGCGC
ACCATCAAGC CGCTGATCCA GGGCGCGCGC GAGCGCGGCC CGAACACCTG GCTGCCGGAA
GAGCGCGAGC GCTTCGTCGA CCTGTTCGAC GCCGACGATA CCCGCGAGGG CGTCAACGCC
TTCCTGGAAA AACGCGACCC GCAGTGGCGC AACAAATGA
 
Protein sequence
MTTALETYKS GIFDLTHKLT VEKHGHTALI TINHPPANTW DRDSLIGLKQ VVEHLNRDDE 
VYALVVTGQG PKFFSAGADL NMFADGDKAR AREMARRFGE AFETLRDFRG VSIAAINGYA
MGGGLECALA CDIRIAERQA QMALPEAAVG LLPCAGGTQA LPWLVGEGWA KRMILCGERI
DAETALRIGL VEQVVDTGEA RGSALLLAAK VARQSPVAVR TIKPLIQGAR ERGPNTWLPE
ERERFVDLFD ADDTREGVNA FLEKRDPQWR NK