| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1369 |
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| Symbol | |
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| ID | 5109422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1533762 |
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| End bp | 1535549 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502598 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001186866 |
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| Protein GI | 146306401 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2015] Alkyl sulfatase and related hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.923314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0945255 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCT TCTCTCGCTT TGGCGGCCTG CTGCTGGCCG CTGCCTTGCC CTTGGGCGCA
CAGGCCGAAC TGCCGGCCGA GCGTATCGAG CCGAGCATTC ACGCCGAACT GGCCGCGCAC
ACCAGGCACT TCGCCCAGCA GATCTACCGC GTCGCGGGCA ACGTCTATTC GGCGGTCGGC
TGGCAGCTGG GCAACGTGGT GATGATCGAG GCGCCCGAGG GGTTGATCAT CGTCGACACC
GGCGAGTCGG TCAGCGAGTC GCGCAAGATC ATGGCCGAGT TCCGCAAGCT CAGCGACAAG
CCGGTCAAGG CGGTGGTCTA CACCCACTTC CACCCGGATC ACATCAACGG CGTGCAGGCG
TTCGTCAGCC GCGAGCAGGT CGAGCGCGGC GAGGTACAGA TCTATGCCCA CGAGACGCTG
CTGCAGAACG TGGTGGCGCA GGGCGCGCTG GTCGGGCCGA TCCTCGGCGT GCGCTCGGCC
TACAGCTTCG GCTCGTTCCT GCCGGCCAGC GATCAGGAGG GGATGAACGC CGGTATCGGT
CCGCTGGCCA AGGCCGAGCC GTCGTCGTTC ATCGCTCCGA CCGTGACCTT TGGCGAACGC
CTGGACACCA GGATCGCCGG TCTCGACGTG CAGTTTCTGC ACGTCCCCAG CGAGGCGCCG
GATGAGATCA TCCTTTACCT GCCGGACAAT CGCGTGCTGA TCAGTGCCGA GGTCGATCAG
GGGCCGACCC TGCCGAACAT CCATACGCTG CGCGGCACCA GGTTCCGCGA CCCGGTGCAG
TGGGTCGAGA GCCTGGACAA GCTGCGCGCC TACCGGGCCG AGCATATGGT GCCGCTGCAT
GGTCGCCCGG TCAGCGGCCA GGACAGGGTC GAGGAAGTGC TGCGCATGAC CCGCGACGGC
ATCGCCTATA TCCACGACCA GACCGTGCGC TGGATGAACA AGGGCCTGAC CCCGGACGAG
CTGGTGGAGA AGGTCAAGCT GCCGCCGCAC CTGGCCGGCT ACACGCCTTA TCTGCGCGAG
TACTACGGCA CGGTGAAGCA CAGCGTACGG CAGATCTACA ACGGTTACCT GGGCTGGTTC
CAGGGCGACC CGGTGGCCCT CGACCCGACC CCGCCGCGGC AGCAGGCCGA GCGTCTGATC
GCCCTGGCCG GCGGTCGTGA AAAGCTGTTG CTGGAGGCTG GCAACGCCTA TCTGAAGGGC
GACTACCAAT GGGCTGCCGA ATTGGCCGGC TACGCCCTCC GCGTCGACCA CGACGACAAG
CTGGCGCGCG AAATCAAGGC GCGCAGCTTT CGCAAGCTGG GTTACGCCAG CATGAACATC
AACTGGCGCA ACTGGTACCT GATGAGCGCC ATGGAACTGG AGGGCAAGCT CGACGGCGAC
GCCATCCGCC AGCGCTCGTT GGAAATGCGC AAGGTGTTCC TCTCGCCGGA CATGGTGCGC
AGCTTCACCC CGCAGAGCTT CCTGCAGAAC TGGGTGACCC GCGTCGACCC GCAGAAGGCT
GGCGATCTGG AACTGACCCT GGGCTTCAGC TTTCCCGATG TGGACGAGCA GTGGGCGCTG
GAGGTTCGGC GCGGCGTCGC GCAGCTGCAC AAGGGCATTC CCGAAGGCAC CGAGCTGCGC
CTGAGTATGG ACAAGCGTTT CATGGAAACC CTGCTGACCG GCGAGGGCGG CCTGGTCAAG
GGCGTGCTGC TGGGCGATGT GAAAGTCGAT GGCAACCTGC TGGAGATTCG CCGTTTCCTC
GCCTGCTTCG ACTTCGCCGA CGAGGCGTTC GGGCTGACGC TGCGCTAG
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| Protein sequence | MSTFSRFGGL LLAAALPLGA QAELPAERIE PSIHAELAAH TRHFAQQIYR VAGNVYSAVG
WQLGNVVMIE APEGLIIVDT GESVSESRKI MAEFRKLSDK PVKAVVYTHF HPDHINGVQA
FVSREQVERG EVQIYAHETL LQNVVAQGAL VGPILGVRSA YSFGSFLPAS DQEGMNAGIG
PLAKAEPSSF IAPTVTFGER LDTRIAGLDV QFLHVPSEAP DEIILYLPDN RVLISAEVDQ
GPTLPNIHTL RGTRFRDPVQ WVESLDKLRA YRAEHMVPLH GRPVSGQDRV EEVLRMTRDG
IAYIHDQTVR WMNKGLTPDE LVEKVKLPPH LAGYTPYLRE YYGTVKHSVR QIYNGYLGWF
QGDPVALDPT PPRQQAERLI ALAGGREKLL LEAGNAYLKG DYQWAAELAG YALRVDHDDK
LAREIKARSF RKLGYASMNI NWRNWYLMSA MELEGKLDGD AIRQRSLEMR KVFLSPDMVR
SFTPQSFLQN WVTRVDPQKA GDLELTLGFS FPDVDEQWAL EVRRGVAQLH KGIPEGTELR
LSMDKRFMET LLTGEGGLVK GVLLGDVKVD GNLLEIRRFL ACFDFADEAF GLTLR
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