| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1326 |
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| Symbol | |
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| ID | 5109379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1486752 |
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| End bp | 1487606 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640502554 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001186823 |
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| Protein GI | 146306358 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0433346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATC CGGTGCTGTT ACGCAGTTTT CTCGCCGTGG TGCAGACCGG CGGCTTTACC
CGCGCTGCGG CCAGCCTGCA TCTGACCCAG TCCACGGTCA GCCAGCAGGT GCGGCGTCTG
GAGGAGCAGC TTGGCGCCGA GCTGCTCGAC CGCAGCGGCC GCTACGTGGT GACCACCACC
GAGGGTGAGC GCCTGCTCGG TTACGCCAAC CGCATCGTCG CGCTGATGGA CGAAGCCATG
CTGGCGCTGG GGCAGAGCGC GGTGGAGGGC GAGGTGCGCC TCGGCGTGCC GGACGATTTC
GCTGCCAACA GCCTGACCCC TTATCTGGCC GATTTCGCCG ATGCCCATCC GGGTATCCGC
CTGGAGATCA CCAGCGGCCT CAGTCATGAC GTGTGGCGTG CGTTCAATGC CGGCGAGCTG
GATCTGGCGC TGATCAAGCA GCGCGCCGGC AGTGCCAAGG GCCTGGCCAG CTGGGCCGAG
CCGCTGGCCT GGCTCGACAG CCGCGCGCGC CCTGTGCTGG CGCGCAACCC GGTGCCGCTG
GCGGTGTTCC CGCCCAACGG CCTGTATCGC CTGGAAATGA CCCATGCCCT GGACGCCATG
GGCAAACCCT GGCGCATCGC CTATGTCAGC AGCAGCCTGC CCGGCGTCAG CGCCGCGGCC
GAGGGCGGCC TGGGCCTGAC TCTGCTGCCG CGCCGGTTGA TCACCAGCGA GCATCTCGAG
CTGGGCGAGG CCGAAGGCTT CGCACCGGTA GCGCCGGTCG AGGTGGCGCT GCATGCGCGC
AACCAGTTGC CCGGTTATGC GCGGGAGCTG GCGGCGGCGT TGATCGAGGC CTGCGAAGGG
ATTATGGCCG GGTAG
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| Protein sequence | MLDPVLLRSF LAVVQTGGFT RAAASLHLTQ STVSQQVRRL EEQLGAELLD RSGRYVVTTT
EGERLLGYAN RIVALMDEAM LALGQSAVEG EVRLGVPDDF AANSLTPYLA DFADAHPGIR
LEITSGLSHD VWRAFNAGEL DLALIKQRAG SAKGLASWAE PLAWLDSRAR PVLARNPVPL
AVFPPNGLYR LEMTHALDAM GKPWRIAYVS SSLPGVSAAA EGGLGLTLLP RRLITSEHLE
LGEAEGFAPV APVEVALHAR NQLPGYAREL AAALIEACEG IMAG
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