| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1306 |
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| Symbol | |
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| ID | 5109122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1464441 |
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| End bp | 1465766 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502532 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001186803 |
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| Protein GI | 146306338 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.680576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.417746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTGCCC AATTCGCCCT GCATGAACGC CTGCTCAAGG CCGTGGCCGA GCTTAACTTC
GTCGAGCCCA CCCCGGTGCA GGCGGCAGCG ATTCCGCCAG CGCTGGAGGG CAAGGACCTG
CGGGTGATCG CCCAGACCGG CAGCGGCAAG ACCGCCGCTT TCGTCCTGCC GCTGCTCAAT
CGCCTGCTCG GTGATGGCAA CTCGCAGCAG CGTGTGAGCA TTCGTGCGCT GATCCTGCTG
CCGACCCGCG AGCTGGCGCA GCAGACGCTC AAGGAAGTCG AGCGCTTCGC TCAGTTCACC
TTCCTCAAGG CCGGCCTGGT GACCGGTGGC GAGGACTTCA AGGTACAGGC CGCGATGATG
CGCAAGATCG ACATCCTGAT CGGCACGCCG GGGCGTCTGA TCGAGCATGC CAATGCCGGC
AACCTGCCGC TGGGCGATGT CGAGGTGCTG GTGTTCGACG AGGCCGACCG CATGCTCGAC
ATGGGCTTCG CCGAGGACGC CCAGCGCCTG GCCGAAGCCT GCGGCCCGCA CCAGACCCTG
CTGTTCTCCG CCACCACCGG CGGCAATGGC CTGCGCGAGA TGGTCGCCAA GGTGCTCAAG
GAGCCGCAGC ACCTGATGCT CAACAGCGTC AGCCAGCTCA ACGAGGGCAC CCGTCAGCAG
ATCATCACCG CCGACCACAA CCACCACAAG GAGCAACTGG TCGACTGGCT GCTGGCCAAC
GAGACCTATG ACAAGGCCAT CGTCTTCACC AACACCCGGG TGCAGGCCGA CCGTCTCTAC
GGCAAGCTGG TGGCGGCCGG GGTCAAGGCC TTCGTGCTGC ACGGCGAGAA GGACCAGAAG
GACCGCAAAC TGGCCATCGA GCGCCTGCGC CAGGGCGCGG TCAAGGTGCT GGTGGCCACC
GACGTGGCGG CGCGCGGACT GGATGTCGAC GGCCTGGATC TGGTGATCAA CTTCGACATG
CCGCGTTCGG GCGACGAGTA CGTGCACCGC ATCGGTCGCA CCGGCCGCGC CGGTGGCGAA
GGTCTGGCCA TCTCGCTGAT CTGTCACACC GACTGGAACC TGATGTCGAG CATCGAGCGC
TACCTCAAGC AGCGTTTCGA GCGCCGTACC ATCAAGGAGC TCAAGGGCAG TTACCAGGGG
CCGAAAAACC TCAAGGCTTC GGGCAAGGCC GCTGGCAGCA AGAAGAAAAA GACCGACAAG
AAGGACCCGA AGAAGGCCGC TGCGCCCAAG CGCAAGACCG GACCGCGCCC GGCCGGCAAG
CCGTCGGCAC TGGTCAGCGA GGACGGCAGC GCGCCGCTCA AGCGCAAGAA GCCGGCAGCG
GAGTGA
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| Protein sequence | MFAQFALHER LLKAVAELNF VEPTPVQAAA IPPALEGKDL RVIAQTGSGK TAAFVLPLLN
RLLGDGNSQQ RVSIRALILL PTRELAQQTL KEVERFAQFT FLKAGLVTGG EDFKVQAAMM
RKIDILIGTP GRLIEHANAG NLPLGDVEVL VFDEADRMLD MGFAEDAQRL AEACGPHQTL
LFSATTGGNG LREMVAKVLK EPQHLMLNSV SQLNEGTRQQ IITADHNHHK EQLVDWLLAN
ETYDKAIVFT NTRVQADRLY GKLVAAGVKA FVLHGEKDQK DRKLAIERLR QGAVKVLVAT
DVAARGLDVD GLDLVINFDM PRSGDEYVHR IGRTGRAGGE GLAISLICHT DWNLMSSIER
YLKQRFERRT IKELKGSYQG PKNLKASGKA AGSKKKKTDK KDPKKAAAPK RKTGPRPAGK
PSALVSEDGS APLKRKKPAA E
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