| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1264 |
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| Symbol | |
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| ID | 5109080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1425048 |
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| End bp | 1426115 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640502489 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001186761 |
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| Protein GI | 146306296 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.196717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAGC CGCCCAAACC GCCCAGCATC ATCGACCTGT ATCCCGAGGA GACCCGCGAG
GCAGCGGCGC TGCTCAAGCA GGCCGTGCCA TTGATGATGC GCCACGATAT CCCGCCCAAT
CCGGTGCACT ATGCACTCTG GTACACCTAC AGCAGAGGTA GCGAGCCGGA GCTCAACCGT
CGCCTGGACA AGGTCGTCGA GGATTTCGAC GTGTTCCCGC CGGATACCGC CAGCAAACTC
TTTCGCGACT ACATCATTCG CGGCGAGCTG GAGGAAGCCC GTGCCGGCCA GCAGCAGGTG
ATCGAACTGG TCGATGACAT CGAGGGTGAC GTTTCCCGCA GCGTGATCGG CAGCGAGAAC
TATCAGCAGA GCCTCAGTCA TGGGCTAAGC GCCCTGCAGG AACCGATCAT CGACGACCTG
CCCAGCGTGC TCAGCGGTTT GCAGGAAAGC ACCCAGCTGA TGCAGGACCA GCAGGAGAAG
TTTCTCTACC GCCTGCGCGC CGCCCAGGAG GAAATCACCC ACCTGCGCAG TCAGCTCGAG
CGGGCGCACC TGGCTGCAAC GCTCGACAGC CTGACCCGCG TGTTCAACCG ACATGCCTTC
ACCCGCCTGC TGGAACGCGC CCTGAGCGAA ACCCACAAGG GCCTGGCGCT GGTCATTCTC
GATATCGACC ACTTCAAACA GTTCAACGAC CAGTACGGCC ACCCGCTGGG TGATCGGGTG
TTGCAGCACG TTGGCCAACT GTTGCGCGAC CTTCTACCAT CAGGCGCCTT TGCCGCCCGT
TATGGTGGCG AGGAATTTTG CGTGGTACTG CGCGACTGCG TCGACCTGGG AGCGGTTCTC
GAATTTGCCG AAAAACTACG CAACAAGATC CAGGCGCTGC GGGTCAAGGT ACGCCGTACC
GATCAGGTGC TCGACAGCAT TACCGCCTCC TTCGGCTGCG CCCTGGCCGA GGCGGACGAC
AGCCTGGAAA CACTGCTGAC CCGCGCCGAC GACGCGCTCT ATCAGGCCAA GCGCAGTGGC
CGCAACCAGG TTCACCCGAT TACCAGCAAA ACCGTGCTAA GCGCTTGA
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| Protein sequence | MSQPPKPPSI IDLYPEETRE AAALLKQAVP LMMRHDIPPN PVHYALWYTY SRGSEPELNR
RLDKVVEDFD VFPPDTASKL FRDYIIRGEL EEARAGQQQV IELVDDIEGD VSRSVIGSEN
YQQSLSHGLS ALQEPIIDDL PSVLSGLQES TQLMQDQQEK FLYRLRAAQE EITHLRSQLE
RAHLAATLDS LTRVFNRHAF TRLLERALSE THKGLALVIL DIDHFKQFND QYGHPLGDRV
LQHVGQLLRD LLPSGAFAAR YGGEEFCVVL RDCVDLGAVL EFAEKLRNKI QALRVKVRRT
DQVLDSITAS FGCALAEADD SLETLLTRAD DALYQAKRSG RNQVHPITSK TVLSA
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