| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1091 |
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| Symbol | |
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| ID | 5108064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1226808 |
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| End bp | 1227920 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640502315 |
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| Product | succinylglutamate desuccinylase/aspartoacylase |
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| Protein accession | YP_001186590 |
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| Protein GI | 146306125 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3608] Predicted deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.108128 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGTA TCGACCACCC ACTGCCCTGG AGCCCGACCG GAACCAGCCG TCACCTCAGC
GTGCTGCGTT ACGGCAGCGG CCCGTGCAAG GCCTACATCC AGGCCAGCCT GCATGCCGAC
GAGCTGCCGG GCATGCGCGT GGCGGTGGAG CTCAGGCGTC GCCTGCAGCA GCTGGAAAGC
GCCGGACGCC TGACCGGCGT GATCGAGCTG GTACCGGTGG CCAACCCCAT CGGCCTGAGC
CAGCTGTTCC AGGCGGCGGT CCAGGGCCGC TTCGAATTCG CCAGCGGCAG AAACTTCAAC
CGCGACTTCG TCGATCTGGC CGCCGCGGTC GCCGCGCATG TGGAAGGCCA CCTGGGCAGC
GACGGGCCGA GCAACGTGCG CCTGATTCGC CGCGCCATGA TCGAGGCGCT GGACGCCCTG
CCCGCGCCGG CCTCGGAGCT GGAAGGCATG CAGCGTCTGC TGCTGCGTCA CGCCTGCGAT
GCCGACGTCG TGCTCGACCT GCACTGCGAC TTTGAGGCCG CGGTGCACCT GTACAGCGCG
CCGCAGCACT GGCAGGCGCT GCGCCCTCTA GCGGCGCGCC TGCAGGCCGG TGCGGTGCTG
CTGGCCGAGG ATTCCGGCGG CAGCTCGTTC GACGAGGCCT GCGCAATGCC CTGGCAGCGC
CTGCGCCAGC GTTTCCCCGA AGCCGAAATT CCCCTGGCCT GCCTGGCCAC CACCGTGGAG
CTGGGCGGCA TGGCGGACAC CGAAGCCGAA CGCGCGGTAG CCAGCGCCGA GGCGATTCTG
GCCTTCCTCG CCGAGCAGGG ACTGATCGCC GGCGACTGGC CGGCAGCGCC GGAACGCTGC
TGCGAGGCCA CGCCCTTTGC CGGTGCGCAG TACGCCCTCG CCCCGCATCC GGGCGTGGTC
AGCTTCTTCA AGCAGCCGGG CGAGTGGGTC GAACGCGGCG AAGCACTGTT CGAGGTGATC
GACCCCTTGA GCGAGCAGCA CAGCATCGTC CGCGCCGAAA CCTGCGGCGT GCTCTATGCC
CGCGAGCGCA TGCGCTTCGC CCGCCCCGGC CTGTGGCTGG CCAAGGTCGC CGGGGCAACG
CCCATTCGCC AGGGTCGCCT GCTCAGCGAC TGA
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| Protein sequence | MQRIDHPLPW SPTGTSRHLS VLRYGSGPCK AYIQASLHAD ELPGMRVAVE LRRRLQQLES
AGRLTGVIEL VPVANPIGLS QLFQAAVQGR FEFASGRNFN RDFVDLAAAV AAHVEGHLGS
DGPSNVRLIR RAMIEALDAL PAPASELEGM QRLLLRHACD ADVVLDLHCD FEAAVHLYSA
PQHWQALRPL AARLQAGAVL LAEDSGGSSF DEACAMPWQR LRQRFPEAEI PLACLATTVE
LGGMADTEAE RAVASAEAIL AFLAEQGLIA GDWPAAPERC CEATPFAGAQ YALAPHPGVV
SFFKQPGEWV ERGEALFEVI DPLSEQHSIV RAETCGVLYA RERMRFARPG LWLAKVAGAT
PIRQGRLLSD
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