| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1084 |
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| Symbol | |
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| ID | 5108057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1220704 |
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| End bp | 1221135 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502308 |
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| Product | alkylhydroperoxidase |
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| Protein accession | YP_001186583 |
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| Protein GI | 146306118 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.359651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGACTGA ACTGGAGCAA GGCCTCGCCC CAGGCCTACA AGGCCATGCT TGGCCTGGAA
GCGGTGCTCG AACAGAGCGG CCTCGAACTG CCCCTGCTGG AGCTGGTGCG CCTGCGCGCC
TCGCAGCTCA ACGGCTGCGC CTACTGCGTG CAGATGCATG CCAATGACGC CCGCCGCGGT
GGCGCCAGCG AGGCGCGTCT GCAGACGGTT TGCGTGTGGC GCGAAAGCGC GCACTTCAGC
GCTCGCGAAC GAGCGGCACT GGCCTGGACC GAGAGCCTCA CCCGCCTCAG CAGCCAGCAC
CCGAGCGACG CCGAATATGC CGAGCTGGGC GAGCATTTCG ACGATGCCGA GATCGCCAAC
CTGACCCTGG CGGTGGCCAC CATCAACGCC TGGAACCGCT TCGGCGTCGG TTTCGCGCTC
AAGGCCGAAT GA
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| Protein sequence | MRLNWSKASP QAYKAMLGLE AVLEQSGLEL PLLELVRLRA SQLNGCAYCV QMHANDARRG
GASEARLQTV CVWRESAHFS ARERAALAWT ESLTRLSSQH PSDAEYAELG EHFDDAEIAN
LTLAVATINA WNRFGVGFAL KAE
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