Gene Pmen_1064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1064 
Symbol 
ID5107723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1202367 
End bp1202882 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content62% 
IMG OID640502288 
Producthypothetical protein 
Protein accessionYP_001186563 
Protein GI146306098 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGC TATGCGCTGT GGCTGCCTTT GCAGCTTTGA CCGTGGGGCA GTTGGGGGCA 
GTACAGGCTG CGGACGTGAC CGCTGCCATC GGCCAGAGCG GCGATTCCAC CATGGTGTAT
CGCCTGGGGG CTCAGTGGGA CTGGGACAGC AGCTGGCTGC AGAGCAGCTA TGGCCGCCTC
ACCGGTTATT GGGACCTGGG GTATACCTAC TGGGACGGTG ATGAGACGGC GAGCAACCAC
AGCCTGTCGT TCTCCCCGGT GTTCGTCTAC GAATTCGCCG GGCAGAACGT GCGCCCGTAC
ATCGAAGCGG GCATCGGTGT TGCCGCCTTC TCCAGCACCG AGCTGGAAAG CAACAAACTG
GGCTCTTCGT TTCAGTTCGA GGATCGCATC GGCGTCGGCC TGCGTTTCGC TGGCCAGGAG
ATCGGCCTGC GCGCCGTGCA CTATTCCAAC GCCGGCCTGA AGAACCCCAA CGACGGTGCC
GAAGCGTACA CCCTGCACTA CCGCACCAGT TTCTGA
 
Protein sequence
MKKLCAVAAF AALTVGQLGA VQAADVTAAI GQSGDSTMVY RLGAQWDWDS SWLQSSYGRL 
TGYWDLGYTY WDGDETASNH SLSFSPVFVY EFAGQNVRPY IEAGIGVAAF SSTELESNKL
GSSFQFEDRI GVGLRFAGQE IGLRAVHYSN AGLKNPNDGA EAYTLHYRTS F