Gene Pmen_1035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1035 
Symbol 
ID5108657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1174036 
End bp1174278 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content65% 
IMG OID640502257 
Productmolybdopterin synthase subunit MoaD 
Protein accessionYP_001186535 
Protein GI146306070 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1977] Molybdopterin converting factor, small subunit 
TIGRFAM ID[TIGR01682] molybdopterin converting factor, subunit 1, non-archaeal
[TIGR01687] MoaD family protein, archaeal 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.964546 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCG TGCAGTATTT CGCCCGCTAC CGCGAAACCC TGGGCCGTGA CGACGAACAA 
CTCAGCGGCG ACTTCGCCAC CCTCGACGAC CTGCGCCTGC ACCTGGTTGC CCGCGGCGGC
GAGTGGGAAG TGCTGGGCGA GCAGAACCTG ATGTGCGCGC GCAATCAGGA GCTGTGCAGC
CTCGACGAGC CGCTGGCCGA AGGCGATGAA GTGGCCTTCT TTCCTACCGT CACCGGCGGT
TGA
 
Protein sequence
MIRVQYFARY RETLGRDDEQ LSGDFATLDD LRLHLVARGG EWEVLGEQNL MCARNQELCS 
LDEPLAEGDE VAFFPTVTGG