Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1026 |
Symbol | |
ID | 5108648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1161689 |
End bp | 1163224 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640502248 |
Product | carbohydrate-binding and sugar hydrolysis |
Protein accession | YP_001186526 |
Protein GI | 146306061 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.931695 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGTA ACGGCTTAGC TCTTCCCCTG CTCCTCGGCG CCCTGCATCT GCTGGCGCCG CTGGCCCAGG CCAACCCGCT GGAGCACCAG TTCGACTACC GCGTGCGCAC CGCACCCGCC GAAGAGCTGC ACCTGGAAAC CCCGGAGCTG CCGGACCTGT CCGGCTACAC CCTGGACGCC GTGCTGGCCA AGATTCCGCA AGGCGCCAAG GGCCAGGTGG CGGTGCGCCG CATGCTGCGC CAGGACGCGC TGAAGGACTT CACCGGCGGC AACGAACGCC TGCGCGAGTG GGTCAAGCGC CAGCAGGGCA TGCCCATGGC GATCTTCATC GAAGGTGGCC TGGTCACCGC TCAGGACCTG GCTGCGGCCC TGCCCGACAG TCAGTTCGAA GAGCAGGAGC CGGGCGTGTA CATCGCCCGC CTGCCCATCG TCGTCGCCGA AGGCGCGGCG CTGCATGTGG GCAAGGAAAC CCGCGAGCTG CGCCTGTCGC AGGAGCGCGG CTCGTTCCTG GTCAACGACG GCCTGATGTT CCTCACCGAG ACCCGCATCA CCGCCTGGCG CGAGGCCGAC AACGGCCCGG CGACGATGCG CGACAACGGC AAGGAATTCC GTCCCTTCCT GGTGTCCTGG GGCGGCAGCG AGCTGTACAT CGCCAGCACC GTGCTGACCA GCCTGGGCTA CGACACCTCC AAGTCCTACG GCGTGTCGAT CACCCAGTAC ACGCCGAACA TGCACAAACG CCTGCAGCGC GAGGAGCCGA CCGGCTGGCT GATCGACTCG GAATTCATCG ACCACTGGTA CGGCTTCTAC TGCTACGAAG CGCAGAACGT GGTGATCAAG GGCAATACCT ACCGCGACAA CATCGTCTAC GGCATCGACC CGCACGACCG CTCGCACGGC CTGATCATCG CCGAGAACCG CGTCTTCGGG ACCAAGAAGA AGCACGGCAT CATCATCTCG CGCGAGGTCA ACGACAGCTG GATCATCAAC AACGAGAGCT TCGACAACAA GCTCTCCGGG GTGGTGATCG ACCGTAACAG CGAACGCAAC CTGATCGCCT ACAACCGCGT GTACGGCAAC CATTCCGACG GCATCACCCT GTACGAGAGC AGTGACAACC TGCTGTGGGG CAACCAGGTG CTGGGCAACC AGCGCCACGG CATCCGCATC CGCAACAGCG AGAACATCCG CCTTTACGAA AACCTTTCGG CGATGAACCA GCTCACCGGC GTGTATGGCC ACATCCGCGA CCTCTCCGAC ACCGACCGCG ACCTCAAGCT GGACCCGTTC GACACCAAGG TATCGATGAT CATCGTCGGC GGCACCCTGG CCGGCAACGG CTCCAGCCCG ATCAGCATCG ACTCGCCGCT GTCGGTCGAG CTGTACCGCG TGAAGATGCT CGCCCCGCGC AAGAGCAGCG GTATCCAGCT CGCCGGCATT CTCGGCGACA AGCAGGAGCA GATCCTCGAC CTCATGGTGC GCCAGCGCCT GCCCGTGCTG ATCGACCCGA TCCAGCCCGA GAAACTGACC AATTGA
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Protein sequence | MQRNGLALPL LLGALHLLAP LAQANPLEHQ FDYRVRTAPA EELHLETPEL PDLSGYTLDA VLAKIPQGAK GQVAVRRMLR QDALKDFTGG NERLREWVKR QQGMPMAIFI EGGLVTAQDL AAALPDSQFE EQEPGVYIAR LPIVVAEGAA LHVGKETREL RLSQERGSFL VNDGLMFLTE TRITAWREAD NGPATMRDNG KEFRPFLVSW GGSELYIAST VLTSLGYDTS KSYGVSITQY TPNMHKRLQR EEPTGWLIDS EFIDHWYGFY CYEAQNVVIK GNTYRDNIVY GIDPHDRSHG LIIAENRVFG TKKKHGIIIS REVNDSWIIN NESFDNKLSG VVIDRNSERN LIAYNRVYGN HSDGITLYES SDNLLWGNQV LGNQRHGIRI RNSENIRLYE NLSAMNQLTG VYGHIRDLSD TDRDLKLDPF DTKVSMIIVG GTLAGNGSSP ISIDSPLSVE LYRVKMLAPR KSSGIQLAGI LGDKQEQILD LMVRQRLPVL IDPIQPEKLT N
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