Gene Pmen_0944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0944 
Symbol 
ID5108802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1066837 
End bp1067850 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content63% 
IMG OID640502161 
Producthypothetical protein 
Protein accessionYP_001186444 
Protein GI146305979 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.659342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.734525 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGTG CAAAATCCTT ATCCCTGCTT GGTCTGAGCC TTACCATGCT CAGCTCCGCA 
ACCCTAGCCG ATACCGTCTG GCTGACCAAT GGTGACCGCC TGACCGGCAC CATCCGCTTC
TTCGACGGCA GCAAGCTGCT GCTGGAAACC GACTATGGCG GTTCCATCCC GCTGAGCTGG
AAGAAGATCG CCACCCTCGA GAGCGACCAC GAATTGCTGG TCAAGCTCGG CCCGGTCAAC
GGTGAGCGCG CCAAGGCGCT GCTCGCGGCC GAGCCGGGCA AGGTGACCCT GGCCAATGGC
GATGTGCCGA CCACCGTCGA GCTGGCGCAG ATCGAGCAGA TCATGAAGCC CAAGCCGCTG
GTGGAGGACT TCACCTGGAA GGGCAACGTC GATCTGGCCC TGGACTACAA GCGCGGCGAG
CGCGATTCCG ACGACTACGA TGTGGACGTC AAGACCCAGG CGCGTCATGG CCTGTGGCGG
CACAATGCGC AGGCCGATTA CAACCGCGAG CTGAAGAACG ACGTGGTGAG CACGGATAAC
TGGAGCGCCG AGTACGCCCT CGACCGCTTC CTCACCGAGC AGTGGTTCTG GCAGGGGCGC
TTCGAGTACA AGCGCGATCG CATCGAAGAG GTCGAGCGCC AGCGTACCCT GGGTACCGGT
CCGGGTTACC AGTTCTGGGA CAACGAGCTG GGCGCCTTCT CCATCGCCAC CCTGGTCAAC
CGCAGCGACT ACCGCTACAG CGATGGCGAG CAGGATCGGT TCTACGCCTT GAGCGTCAAG
TGGGATTACA ACCGCTACCT GATCGGCAAG ACCGTGGAGC TGTTCAGCTC CGGTGAGGTC
GGCAAGCCGC TCGAGGGCGT GGCCGACTAC ACCCTGGATG CCGAAGTGGG CCTGCGCTAC
AAGGTCACCG ACTGGGCTTC GCTGAACATG AAGGCCGAGA AGGACATCGT CAGCGGCGCC
GACGGCGACC TGGACGAAAC CCGCTACACC CTGGGCTTCG GCGTGGGTTG GTAA
 
Protein sequence
MSRAKSLSLL GLSLTMLSSA TLADTVWLTN GDRLTGTIRF FDGSKLLLET DYGGSIPLSW 
KKIATLESDH ELLVKLGPVN GERAKALLAA EPGKVTLANG DVPTTVELAQ IEQIMKPKPL
VEDFTWKGNV DLALDYKRGE RDSDDYDVDV KTQARHGLWR HNAQADYNRE LKNDVVSTDN
WSAEYALDRF LTEQWFWQGR FEYKRDRIEE VERQRTLGTG PGYQFWDNEL GAFSIATLVN
RSDYRYSDGE QDRFYALSVK WDYNRYLIGK TVELFSSGEV GKPLEGVADY TLDAEVGLRY
KVTDWASLNM KAEKDIVSGA DGDLDETRYT LGFGVGW