| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0867 |
|---|
| Symbol | |
|---|
| ID | 5108961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 989354 |
|---|
| End bp | 990211 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640502083 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001186367 |
|---|
| Protein GI | 146305902 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1660] Predicted P-loop-containing kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0154337 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTGA TCATCGTCAG CGGTCGCTCC GGCTCGGGCA AGAGCACCGC CCTCGATGTA
CTTGAGGACA ACGGTTTCTA CTGCATCGAC AACCTGCCTG CCGGCCTGTT GCCGGACCTG
GCCGAACGCG CCCTGCTCAA TACCGAGATG CTCCTGCCGC AGGTGGCCGT GTCGATCGAT
GCGCGCAACC TGCAGAGCCA TCTGCGGCGT TTCCCCGAAT TGCTCGAGCA GGTGCGCCAG
CGCAATATCC GCTGCGACAT TCTCTACCTC GACGCCGACG ACGAGACCCT GCTCAAGCGC
TTCTCGGAAA CCCGCCGGCG TCACCCGCTG ACCGACGAGA ACCGCTCGCT GGCCGAAGCC
ATCGCCGACG AAACCCAGGT GCTGGCGCCC ATCGTCGACC TGGCCGACCT GAAGATCGAC
ACCACCCACC TCAACCTCTA TCAATTGCGC GACAGCCTCA AGCTGAGGCT GCTCAACCAG
CCGGAACCGG GTACTGCCTT TCTCTTCGAG TCCTTTGGCT TCAAGCGTGG CATGCCGGTG
GATGCCGACC TGGTGTTCGA TGCCCGCTGC CTGCCGAACC CTTACTGGAA ACCGGAGCTG
CGCGATTTCT CCGGTCTGCA GCAGCCGGTG ATCGACTACC TCGCCGCGCA ACCGGAGGTG
GAGGAAATGT ATCAGGACAT CCTCGCCTAC CTGGAAAAAT GGCTGCCGCG CTTTGCCGCC
AGCAACCGCG CCTACGTGAC CATCGCCATC GGCTGTACCG GCGGGCACCA TCGCTCGGTG
TACCTGGCCA ATCGCCTCAG CCAGGCCCTG AAGAAACCGC TGAAGAACGT CCAGGTACGT
CACCGCGACC TCAGCTAA
|
|---|
| Protein sequence | MRLIIVSGRS GSGKSTALDV LEDNGFYCID NLPAGLLPDL AERALLNTEM LLPQVAVSID
ARNLQSHLRR FPELLEQVRQ RNIRCDILYL DADDETLLKR FSETRRRHPL TDENRSLAEA
IADETQVLAP IVDLADLKID TTHLNLYQLR DSLKLRLLNQ PEPGTAFLFE SFGFKRGMPV
DADLVFDARC LPNPYWKPEL RDFSGLQQPV IDYLAAQPEV EEMYQDILAY LEKWLPRFAA
SNRAYVTIAI GCTGGHHRSV YLANRLSQAL KKPLKNVQVR HRDLS
|
|---|
| |