| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0810 |
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| Symbol | |
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| ID | 5108904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 922954 |
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| End bp | 923841 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502026 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001186310 |
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| Protein GI | 146305845 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCAAC TCAAACGCAT GGCGCTGTTC GCTACGGTGG TGCAGAAGGG CTCGATGGTC
GCTGCCGCCG AGGTCCTGGG CATGAGCGCG TCTGCCGTCA GCCAGCAGAT CCGTCGGCTG
GAGGAGGCCA CCGGCGTCAG CCTGCTGCAT CGCACCACGC GCAAGCTGAC CCTGAGCGAG
GCGGGGGCCC AGTTCTACGA GAGTTGCCGG CAGATCGTCG AACTGGCCGA GCAGGCCGAG
CAACGTCTGG CCGAGCAGCG TGACGCGCCA GTGGGCGAGC TGCGTATCGC CGCACCGGTG
GGCTTTTCCG GGCCGGTGTT GAGTGAAGCG CTGGCGCCGC TCTTGAGCGC GCATCCGGCG
CTGAGCCTGC GTCTGTTTTT CCAGGACGAG CAGATCGACC TGATCGAGCA GCGTATCGAC
CTGGCCATCC GCGTCGGCCA ACTGGATGAC TCCAGCCTGG TGGCCCGACA TGTCGCCGAC
TGGCGCATGC TGGTCTGCGC TGCGCCGGCC TACCTGGCGC GCCACGTCTG GCCGACGCAG
CCGCAGCAAC TGCTCGATCT GGACTGGATC GCGCTGAACA CCGAGCGCAG CCAGCATCTG
CAGCTGCACG GTCCGGGCGG CGCAACGCAG CGCCTGCGTC TGGAAAGTCG CATCGCCTGC
AACAACATTC TTGCGGCGCG CCAGTTCACC CTGGCGGGCA TGGGCGTTTC GCTGCAGCCG
GAGCCGGAAA TCCGCGAGCT GCTGACGCGC GGCGAGCTGC TGGCCCTGCT GCCGGACTGG
CAGCTGGAGC CGATCGGCCT GCATATCGTC ACCCCGCGTC GCGACGCGCA ACCGGCCAAG
GTGCGCTACG CCATCGAGGC GCTAAGGCGG CATCTGGTCA GCGCATGA
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| Protein sequence | MEQLKRMALF ATVVQKGSMV AAAEVLGMSA SAVSQQIRRL EEATGVSLLH RTTRKLTLSE
AGAQFYESCR QIVELAEQAE QRLAEQRDAP VGELRIAAPV GFSGPVLSEA LAPLLSAHPA
LSLRLFFQDE QIDLIEQRID LAIRVGQLDD SSLVARHVAD WRMLVCAAPA YLARHVWPTQ
PQQLLDLDWI ALNTERSQHL QLHGPGGATQ RLRLESRIAC NNILAARQFT LAGMGVSLQP
EPEIRELLTR GELLALLPDW QLEPIGLHIV TPRRDAQPAK VRYAIEALRR HLVSA
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