| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0704 |
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| Symbol | |
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| ID | 5109034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 779238 |
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| End bp | 781052 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640501917 |
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| Product | allophanate hydrolase |
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| Protein accession | YP_001186204 |
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| Protein GI | 146305739 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR02713] allophanate hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCTC GAAGCATGTC CAACGCACCG ACCGCCCTCA CCCTCGCCGG GTGGCAGCAA
GCCTACCGCG ACGGTCAATC GCCAGCCGAA CTGCTGCACG CCCTGCGCCT GGAGTTGCGC
ACTGATGACA GCGCGTGGAT CGCCCTGGCC AGCGAAGCTC AGCTCAACGC CCAACTCGAT
GCCCTGGCCA GCGCGCTGCA GGATGCCGCC GGCGACCTGA GCAAGCTGCC GCTGTACGGC
GTGCCCTTCG CCATCAAGGA CAATATCGAC GCCGCCGGCT GGCCCACCAC CGCGGCCTGC
CCGGAGTTCG CCTACGGCGC CGAAACCGAC GCCAGCGTGG TCGCCCGCCT GCGCGCCGCC
GGCGCCATCC TGATCGGCAA GACCAACCTC GACCAGTTCG CCACCGGCCT GGTCGGCACC
CGCTCGCCCT ACGGTGCAGT GCCTAACAGT TTCAACCCGG ATTACGTCAG CGGCGGCTCC
AGTTCCGGCT CGGCCAGCGT GGTCGCGCGC GGCCTGGTGC CCTTCTCGCT GGGCACCGAC
ACCGCTGGCT CCGGCCGCGT GCCGGCAGGC TTCAACAATA TCGTCGGGCT CAAGCCGACC
AAGGGTTGGC TGCCCAACAC CGGCCTGGTG CCGGCCTGCC GCAGCATCGA CTGCATCTCG
GTGTTCGCCC TGACCGTGGC CGATGCGCTG ACCGTGGCCA ATATCGCCGG TGGCTACGAC
GCCGCCGACG CCTACAGCCG CAAGAACCCG AACAGCGCCA AGGTCGGCAT GCCGGCCCAG
CCGCGCCTGG CGGTGCCGGC CAACCCCGAG TTCTTCGGCG ACAGCCAGAA CCAGGTCGTC
TATGAGGCCG CCCTGGGCCA ACTGCGCGAA CTGGGCGCCG AACTGGTGGA GATCGATTTC
GCTCCCTTCC AGCAACTGGC TGAGCAGCTT TACTACGGCC CCTGGGTCGC CGAGCGCACC
GTCGCGGTGG AAGGGGTCGA CCCGGCACAT ATCAATCCGG TGGTGCGCGG CATCGTCGAA
AACGGCCACC AGTACAGCGC CTGCGACGCC TACAAGGCCG AGTACATTCG CGCCGAGCTG
AGCCGCCGCA TCAACGACGC CCTGGCCGGC TTCGACGCCC TGGTGGTGCC GACCTCGCCG
ACCATCCGCA CCCTGGCCGA GATGCAGGCA GAGCCGGTGC TATTCAACAG CCAGTTCGGC
ACCTACACCA ACTTCACCAA CCTCGCCGAC CTGTGCGCCC TGGCCGTACC GGCCGGCCTG
CGTGCCGACG GCCTGCCGGC CGGCATCACC CTGATCGCCC CGGCCTGGCA TGACCAGGCA
TTGGCCGCCT TCGGCCAGCG CTGGCAGCAG GCACTCAATC TGCCGCTGGG CGCCACTGGC
AAGCCGCTGC CCGTGCAAAT CGCCAGCGAC AAACCGGCGC CGGGCTGCAT CCGTGTCGCG
GTGGTCGGCG CGCACCTGAC CGGCATGCCG CTGAACTTCC AGCTCACCAC GCGCGATGCC
GTGCTGGTAG AGCAGACCAC CAGCGCCGCG CATTACCGCC TCTTCGCGCT GCCCGGCACC
GTGCCGCCCA AACCGGGCCT GGCACGGGTC GCCGAGGACG GCGCCGAGAT CATCGTCGAG
CTGTGGGACG TGCCGCAGGC GCGCTTCGGT GAATTCGTCG CCGAGATCCC GCCACCGCTG
GGCATCGGCA ACCTCGAGCT GGCCGACGGC CGTTGGGTCA AGGGCTTTAT CTGCGAGCCC
TACGCGCTGG ATGGCGCCCG TGACATCACC AGCTTTGGTG GCTGGCGCGC CTTTATCGCC
GAAACCAGGA AGTGA
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| Protein sequence | MESRSMSNAP TALTLAGWQQ AYRDGQSPAE LLHALRLELR TDDSAWIALA SEAQLNAQLD
ALASALQDAA GDLSKLPLYG VPFAIKDNID AAGWPTTAAC PEFAYGAETD ASVVARLRAA
GAILIGKTNL DQFATGLVGT RSPYGAVPNS FNPDYVSGGS SSGSASVVAR GLVPFSLGTD
TAGSGRVPAG FNNIVGLKPT KGWLPNTGLV PACRSIDCIS VFALTVADAL TVANIAGGYD
AADAYSRKNP NSAKVGMPAQ PRLAVPANPE FFGDSQNQVV YEAALGQLRE LGAELVEIDF
APFQQLAEQL YYGPWVAERT VAVEGVDPAH INPVVRGIVE NGHQYSACDA YKAEYIRAEL
SRRINDALAG FDALVVPTSP TIRTLAEMQA EPVLFNSQFG TYTNFTNLAD LCALAVPAGL
RADGLPAGIT LIAPAWHDQA LAAFGQRWQQ ALNLPLGATG KPLPVQIASD KPAPGCIRVA
VVGAHLTGMP LNFQLTTRDA VLVEQTTSAA HYRLFALPGT VPPKPGLARV AEDGAEIIVE
LWDVPQARFG EFVAEIPPPL GIGNLELADG RWVKGFICEP YALDGARDIT SFGGWRAFIA
ETRK
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