Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0672 |
Symbol | |
ID | 5109002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 746063 |
End bp | 747010 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640501885 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001186172 |
Protein GI | 146305707 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.240082 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAC TCGCTCACGT GCTGCTCGGC CTGTTGTTGG TGTTCGGGCT GACCCTTGCC GGCTTCGTCG CCCTCAACTG GGCGCCGGAT CGTCCTTTGG ATGAGCTCAA GGCGCGCTGG GCGCCGCCGC CTTCGCAGTT CGTCGAGCTC GATGGCCTGT CCGTGCACCT GCGTGACCAG GGCCGGCGCG ACGATCCCGA GCCCATCGTC CTGCTGCACG GCACCTCGGC CAGTCTGCAC ACCTGGGAAG GTTGGGTGAC GGAGCTGGCC AAGCAGCGCC GGGTGATCAG CCTGGATCTG CCCGGCTTCG GTCTGACCGG GCCATTCCCC GATGGCGATT ATCGCCTCGA GCGCTATACC GGCTTTCTCC TCACCCTGCT GGACAGGCTG CAGGTGCCCC GTGCGGTGCT GGTGGGCAAC AGCTTCGGCG GCCAGCTGGC CTGGCGCTTC GCTCTGGCCC ATCCCGAGCG CAGCGCGCGG CTGGTGCTGG TGGACGCCGC CGGCTATCCG CGCAACGCCG AATCGGTGCC GATCGGCTTT CGCCTGGCGG GCGTCCCGGC CCTGGCGCCA GTGATGAGCC ATTTGTTGCC GCGCGCGATG ATCGAGTCGA GCCTGCGCAA CGTTTATGGC GATCCAGACA AAGTCGATGA CGAACTGGTC GAGCGCTACT ACCAGCTGAC GCTGCGCGAG GGCAACCGCC AGGCGCTGCG TCAGCGCTTC GCCCAGGCGC CCAGCGGCGA ACTGCACGAG CGCATCGGCG AACTGCAATT GCCGACGCTG ATCATCTGGG GCGGGCGTGA TCGCCTGATT CCGCCGGACA ATGCCGAACG CTTCGCCGCC GACATCGCCG GCAGCCAGCT GGTGCTGTTC GACGACCTCG GCCACGTGCC CCAGGAAGAG GACCCGCAGC GCACCGTTGC GGTGCTGCTC GCCTTCCTGG CTCGCTAG
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Protein sequence | MKRLAHVLLG LLLVFGLTLA GFVALNWAPD RPLDELKARW APPPSQFVEL DGLSVHLRDQ GRRDDPEPIV LLHGTSASLH TWEGWVTELA KQRRVISLDL PGFGLTGPFP DGDYRLERYT GFLLTLLDRL QVPRAVLVGN SFGGQLAWRF ALAHPERSAR LVLVDAAGYP RNAESVPIGF RLAGVPALAP VMSHLLPRAM IESSLRNVYG DPDKVDDELV ERYYQLTLRE GNRQALRQRF AQAPSGELHE RIGELQLPTL IIWGGRDRLI PPDNAERFAA DIAGSQLVLF DDLGHVPQEE DPQRTVAVLL AFLAR
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