| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0671 |
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| Symbol | |
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| ID | 5109001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 745070 |
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| End bp | 745969 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640501884 |
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| Product | auxin efflux carrier |
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| Protein accession | YP_001186171 |
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| Protein GI | 146305706 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.181249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGCGG TACAGGCAAT TTTGCCGATC TTCGCCCTGA TCGTTCTCGG CTACCTGCTT
GGCTGGCGCC AGTGGCTCAC CAGCGAGTCG GCCGCTGGCC TGGCCAATAT CACCTTCAAG
CTGTTCATGC CCACGCTGCT GTTCGCCGGT ATCGCCAAGG CGTCGCTGGC CGAAGGCCTG
TCGCCGATGC TGCTGCTGGC CTATTACCTG CCGGTGCTGC TGGTGTTCGC CGCGGTCAAT
GCGCTGGCGC ACTGGCGGCG CGGTACGGCG ACGCCGCTGG GCCTGGTGGC GGCCTTTTCC
AACAACGTGC TGGTGGGCAT CCCGCTGATC GCCAGCCTGA TGGGCAACGA CGGCCTGCTC
TACGTCTTCG CCATCCTGGT GTTTCACAGC CTCACGCTGT TTTCCCTGCA CAGCTTCTAC
GCCGCTTTCG GCAGCCAGGA GCGGGTCGAT ACGCGCGCGC TGCTGAAGAA CCTGGCCAAC
CCGATGATCA TCGGCCTGGC ATTGGGCGCG TTGCTCAATC TGTCCGGGCT GGTCGTGCCG
GAGAGCCTGT GGCGGGCGGT GACCTGGCTC GGCCAGGCCG CCTTGCCCTG CGCGCTGATC
GTGCTTGGCG CCAGCCTGTC GCGTTACCGC CTGCGCCCGA CCGGCGAGGC CTGGGGCGTG
GCGTTGGCCA AGCTGCTGCT GTTCCCGGCG CTGGTCTGGT GGCTCAGCGG CCAGCTGCCT
GGCCTGAACG ACACCGCGCG CAGCGTGCTG GTGCTGCTCG CGGCCTGTCC CAGCGGGGTC
AACGTGATGG CCTTTGCCCG TAGCGCCGAA GACAGCCGCA GCGTCAGCGC GGCGATTTCC
CTGTCCACAC TGCTGGCGGC GGTTTCCCTG CCGGCGTGGA TGCTGCTGGT GGGGTTCTGA
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| Protein sequence | MLAVQAILPI FALIVLGYLL GWRQWLTSES AAGLANITFK LFMPTLLFAG IAKASLAEGL
SPMLLLAYYL PVLLVFAAVN ALAHWRRGTA TPLGLVAAFS NNVLVGIPLI ASLMGNDGLL
YVFAILVFHS LTLFSLHSFY AAFGSQERVD TRALLKNLAN PMIIGLALGA LLNLSGLVVP
ESLWRAVTWL GQAALPCALI VLGASLSRYR LRPTGEAWGV ALAKLLLFPA LVWWLSGQLP
GLNDTARSVL VLLAACPSGV NVMAFARSAE DSRSVSAAIS LSTLLAAVSL PAWMLLVGF
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