| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0602 |
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| Symbol | |
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| ID | 5109564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 663967 |
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| End bp | 664491 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640501813 |
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| Product | aspartyl protease-like protein |
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| Protein accession | YP_001186102 |
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| Protein GI | 146305637 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3577] Predicted aspartyl protease |
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| TIGRFAM ID | [TIGR02281] clan AA aspartic protease, TIGR02281 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAAC AGGCACCTGG CCGCCGCGCC GGACGGGTGA TGCTGGTGCT CGCCTGGGGC
GCCGGCCTGC TGCTGGCCAC GCATTTCTTC GGCAATTGGG AAGACCGACA GCACAATCCC
AACCGCACGC CGCAGTCGCT GCATGGCGAC GGTTTCGTCG AGGTCAGCCT GGCCAGCAGC
CGCCAGGGCC ATTACCTGGT CGACGGGCAG ATCGATGGGC AGAAGGTCAC CTTCCTGCTC
GACACCGGCG CCAACCAGGT CGCCGTGCCC AGCGCGGTGG CCGAACGCCT GGGCCTGGTG
CGCGGTGCGC CGATCGTCAT CAGCACCGCC AACGGCCGCG CCACCGGCCA CCGCACGCGC
CTGGCCAGCC TGCGCCTGGG CGATATCGAG CTGCGCGATG TCGCCGCGCT GATCGCCCCC
GGCATGGACG GCGATGAAGT GCTGCTGGGC ATGAGCGCCC TGAAACAACT CGAATTCAGT
CAGAAGGGCG GCACCCTGGT GCTGCGCCAA TCAACCTTGC AATGA
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| Protein sequence | MSEQAPGRRA GRVMLVLAWG AGLLLATHFF GNWEDRQHNP NRTPQSLHGD GFVEVSLASS
RQGHYLVDGQ IDGQKVTFLL DTGANQVAVP SAVAERLGLV RGAPIVISTA NGRATGHRTR
LASLRLGDIE LRDVAALIAP GMDGDEVLLG MSALKQLEFS QKGGTLVLRQ STLQ
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