Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0566 |
Symbol | |
ID | 5108190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 616413 |
End bp | 617495 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640501779 |
Product | appr-1-p processing domain-containing protein |
Protein accession | YP_001186068 |
Protein GI | 146305603 |
COG category | [R] General function prediction only |
COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00315958 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000000000000126999 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATTAGAT TTACACAAGG CAATTTGCTG GAGGCCAAGG TCGATGCCTT GGTCAATACC GTCAACACTG TCGGCGTGAT GGGCAAAGGT ATTGCCCTGA TGTTCAAGGA GCGCTTTGCT GAGAACTACC GGCTATACGC GGCAGCCTGC AAAGCCAAAC AGGTTGAAAC TGGCAAGATG TTTGTTACCC CGGTGCAGGA ACTGGATGGT CCGCGCTGGA TCGTCAACTT CCCCACCAAG CGGCATTGGA AGGCTCCTTC CAAGATGGAA TGGGTCGTTG AGGGGTTGAC TGATCTGCGT ACCTTTATCC TCGATAATCA TATCGAGTCG ATTGCCGTAC CTCCGCTGGG GGCCGGTAAT GGGGGGCTGG AATGGATGGC TGTACGCGAG CAGATCGAGG CTGTTCTGGG CGACCTGCAT GCTGAGATTT TGGTGTTTGA ACCCACTTCG CAGTATCAGA ACGTTGCCAA GCGCTCAGGG GTAGAGAAGT TGACGCCGGC CCGTGCCTTG ATCGCCGAGT TGGTAAGGCG CTACTGGGTA TTGGGTATGG AATGCAGCTT TCTGGAAGTG CAGAAGCTGG CCTGGTTTCT GGAGCGCGGT ATCGAGCGAT TTTCGCCTGC AGACAATCCA CTGAACCTTC AGTTTGTTGC CCATAAATAC GGGCCCTATG CCAACCGTCT TGAGCATTTG CTGAACAATC TGGATGGCAG CTATCTGCAT GCCGAAAAAC GTATCAGCGA TTCGGACCCG CTTGATGTCA TCTGGTTTGA TGACGAGCGT AAGGCCTATT TGCAGGCTTA CTTAAACACT GAGTCAAAGC CCTATCTTGA GGCCTTGGAA CGTACAGCAG ACCTTATCGA CGGCTTTGAG TCGCCCTTTG GTATGGAGCT TTTGGCGACC GTAGATTGGC TGTTGGCCAA GGAGCATGTT GAGGCTACGG TGCCGGCTGT ACGGCAAGCG CTAAGGAAGT GGGGCGGTGG GCCAGGTGCT GCTACACGCA AGGATCGCTT GTTTGATGAT CGTGCGTTGG CCATTGCCTT GGAGCGCCTG ACGCAGTCGG GTTTTAGTGC TGTAGCGGCT TGA
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Protein sequence | MIRFTQGNLL EAKVDALVNT VNTVGVMGKG IALMFKERFA ENYRLYAAAC KAKQVETGKM FVTPVQELDG PRWIVNFPTK RHWKAPSKME WVVEGLTDLR TFILDNHIES IAVPPLGAGN GGLEWMAVRE QIEAVLGDLH AEILVFEPTS QYQNVAKRSG VEKLTPARAL IAELVRRYWV LGMECSFLEV QKLAWFLERG IERFSPADNP LNLQFVAHKY GPYANRLEHL LNNLDGSYLH AEKRISDSDP LDVIWFDDER KAYLQAYLNT ESKPYLEALE RTADLIDGFE SPFGMELLAT VDWLLAKEHV EATVPAVRQA LRKWGGGPGA ATRKDRLFDD RALAIALERL TQSGFSAVAA
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