Gene Pmen_0492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0492 
Symbol 
ID5108411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp527053 
End bp527826 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content70% 
IMG OID640501705 
Productelectron transfer flavoprotein beta-subunit 
Protein accessionYP_001185994 
Protein GI146305529 
COG category[C] Energy production and conversion 
COG ID[COG2086] Electron transfer flavoprotein, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATC TGAATATCGT CGCCCTGGTC TCGGTCGGCG CCCACCCGAC CTCCGGCCGC 
TCGCGCCGCG CCGAACAGGA CGCCCGCGCG GTGGAGCTCG GCCTGCGCCT GGCCGGGCAG
AATCTGCAAC TGCTGCATGC CGGCGACCCA CAGGCCGACG CGCTGCGCGG CTACCTGGGC
ATGGGCCTGG AACAGCTCGA CGTGCTGGAG CAACCCGAAG GCGCCGACGC CCTGCCGCTG
CTGGTGGACT ACCTGCAAGG CAGCCGCACG CAGCTGGTGC TCACCGGCAG CCAGGCGGAA
ACCGGCGAAG GCTCCGGCAT GCTGCCGTTT CTGCTGGCCG AGCGCCTGGG CTGGCCGATG
GTGGTCGGCC TGGCGGAGGT GGAGAAAGTG GAGAATGGCG TGGCCCAGGT GCTGCAGGCG
CTGCCGCGTG GCCAGCGCCG TCGCCTCAAG GTGCGTCTGC CCTGCGTGGC CAGCGTCGAC
AATGCCGCCC CGGTGGCACG CCAGAGCGCC TTCGGCCCGG CCCGCCGCGG TCAGATCGAA
GCCCACGAGG TGACGGTGGT GGATGACCCG TTGCTGGCCG AGGCCAGCCT GCAACCGGCC
AAGCCGCGGC CCAAGCGCCT CAAGGTGATC AAGGCCAAGA CCGGCGCGGA ACGCATGAAG
GCCGCCACGG CCAAGGCCAG TGGTGGCGGC GGTCAGGTGC TCAAGGATGT CTCGCCACAG
GACGGCGCGG AGGCTATCTT CAAACTACTT ATCGAGGAAG GCGTCTTACG CTGA
 
Protein sequence
MTDLNIVALV SVGAHPTSGR SRRAEQDARA VELGLRLAGQ NLQLLHAGDP QADALRGYLG 
MGLEQLDVLE QPEGADALPL LVDYLQGSRT QLVLTGSQAE TGEGSGMLPF LLAERLGWPM
VVGLAEVEKV ENGVAQVLQA LPRGQRRRLK VRLPCVASVD NAAPVARQSA FGPARRGQIE
AHEVTVVDDP LLAEASLQPA KPRPKRLKVI KAKTGAERMK AATAKASGGG GQVLKDVSPQ
DGAEAIFKLL IEEGVLR