| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0380 |
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| Symbol | |
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| ID | 5108302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 394598 |
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| End bp | 396388 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640501596 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001185885 |
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| Protein GI | 146305420 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTATC AGGCGCCATT GCGCGATATG CGCTTCGTGC TGCACGAACT GTTCGACGCC
GCCGGCCACT GCGAGCGCCT GGGCAACGGC CTGGATCGCG AGCTGATCGA CGGCGTGCTG
GAAGAGGCGG CGGCCTTCGC CGCGGGCGAG GTCGCGCCGC TCAATCGCAA CAGCGACGAG
GAGGGCTGCC GCCTGGAGAA TGGCCAGGTC AGCACGCCCA GGGGCTTTGC CGAGGCCTAC
CGGCAGTACG TGGACAACGG CTGGGCGAGC ATGACCGGGC CGGTGGAGTA CGGCGGCCAG
GGCTTCCCGC AGCTGGTGGC CTTCGCCTTC CACGAAATGC TGATGGGCGC CTCGCTGTCC
TTCCGCGTCT ACTCCGGGCT GACCGAGGGC GCCGTGCTGG CGCTGCACAA GCACGGCAGC
GAAACGCTGA AGCAGCAGTA CCTGGGCAAG CTGGTCAGCG GCCAGTGGAG CGGCACCATG
TGCCTCACTG AGCCGCAGGC CGGCACCGAC CTGGCCCTGC TGCGCACCCG CGCCGAGCCG
CAGGCCGATG GCAGCTACAA GGTCAGCGGC AGCAAGATCT TCATCAGCGG CGGCGAGCAG
GATCTGTCGG AAAACATCGT CCATCTGGTG CTGGCGCGTC TGCCCGATGC ACCGGCTGGC
GTGAAGGGTA TTTCGCTGCT GCTGGTGCCG AAATTTATCG CTGCCGCCGA CGGCACACCG
GGCGAACGCA ACACGCTGTC GTGTGGCGCC ATTGAGCACA AGATGGGCAT CAAGGGTGCC
TCCACCTGCG TGATGAACTT TGACGGCGCC ACCGGTTGGC TGGTGGGCGA GGCCAACCAG
GGGCTGGCCT GCATGTTCAC CATGATGAAC GACGCGCGCT TTCAGGTCGG CCTGCAGGGC
CTCGGCATTG GCGAGGCCGC CTTCCAGGGT GCGCTGCGCT ACGCCCGTGA ACGCCTGCAG
TCGCGTGGCC TGGCGGGTGT GCAGGCGCCG GACAAGGCGG CCGATCCGAT CATCGTGCAC
CCCGATGTGC GGCGCATGCT GCTGACGCAG AAGACCCTGG TCGAGGGCAG CCGCATGCTC
GCCGCCTACA CCGCACGCCA GCTGGATCTG GAGCACGGCG CCGAGTCGGC CGATGCGCGC
AAGGCGGCCG GCAAGCGCGC GGCGCTGCTG ATCCCCATCG TCAAGGCGTT CTTCACCGAC
ATGGGCCAGG AGGTGGCCAG TCATGGCGTG CAGGTCTACG GTGGGCACGG CTTTATCCGC
GAGTGGGGCA TGGAGCAACT GATGCGCGAC AGCCGCATCA CCCAGCTCTA CGAGGGCACC
AACGGCATTC AGGCGCTGGA CTATATCCGT CGCAAGCTGC TGGGTGATGG CGGCGCCGAA
TTGAGCGCGC TGCAGGCCGA GTTCAGCGCG CTGTGCGATG CCCAGACCAC GCGCCCGGCG
CTGAAGGAAA TGGCGACCGT CGTGCAGGCG CGTATTGGCG AATGGCGTGA GCTGAGCACG
GAAGTGCTCG CCGCCTGCCA GCGCGATGCG CAGGAGATCG GTGCCACTTC GGTGGATTTC
CTCCAGTACT CGGCCTACGT GCTGCTCGCC GGTTTCTGGC TGCAGGCCGC GGCGCGGGCG
CAGGATGTGC TGGAGGCAGG GAGCGGCGAG GCGGCGTTCT ACCAGGCCAA GCTGCACAGT
GCCGAGTTCT ACCTGCGCCG CGTGCTGCCG CGCGCCAGTG CGCACCGCGA AGCCCTGCTG
GGCGGCGCGC AGTGCCTGAT GGCCATGGAT GAGGACAGTT TCGCGTTCTA G
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| Protein sequence | MSYQAPLRDM RFVLHELFDA AGHCERLGNG LDRELIDGVL EEAAAFAAGE VAPLNRNSDE
EGCRLENGQV STPRGFAEAY RQYVDNGWAS MTGPVEYGGQ GFPQLVAFAF HEMLMGASLS
FRVYSGLTEG AVLALHKHGS ETLKQQYLGK LVSGQWSGTM CLTEPQAGTD LALLRTRAEP
QADGSYKVSG SKIFISGGEQ DLSENIVHLV LARLPDAPAG VKGISLLLVP KFIAAADGTP
GERNTLSCGA IEHKMGIKGA STCVMNFDGA TGWLVGEANQ GLACMFTMMN DARFQVGLQG
LGIGEAAFQG ALRYARERLQ SRGLAGVQAP DKAADPIIVH PDVRRMLLTQ KTLVEGSRML
AAYTARQLDL EHGAESADAR KAAGKRAALL IPIVKAFFTD MGQEVASHGV QVYGGHGFIR
EWGMEQLMRD SRITQLYEGT NGIQALDYIR RKLLGDGGAE LSALQAEFSA LCDAQTTRPA
LKEMATVVQA RIGEWRELST EVLAACQRDA QEIGATSVDF LQYSAYVLLA GFWLQAAARA
QDVLEAGSGE AAFYQAKLHS AEFYLRRVLP RASAHREALL GGAQCLMAMD EDSFAF
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