| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0378 |
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| Symbol | |
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| ID | 5108300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 392365 |
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| End bp | 393261 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640501594 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001185883 |
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| Protein GI | 146305418 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTCA CCAACTTCGA CCTCAATCTG CTGCGCGTGC TCGATGCCCT ACTGCGCGAA
CAGAACGTCT CGCGCGCCGC CGAGCACCTG GCGCTTAGCC AGCCGGCGGT CAGCAATGCC
CTGGGCCGTC TGCGCGAACT GCTCGGTGAC CCGCTGCTGG TGCGCGTGGG CCGGCGCATG
CAGCCCACCC CGCGGGCCCT GGCGCTGGAG GCACCGATCC GCAGCGCGTT GCGTCAACTG
GAACAGAGCC TGAGCGCCGG CGAAGCCTTC GAGCCGGGCG AAAGCCGCCA GCGCTTTCGC
ATCGCCATCA CCGATTACGT CGAGCTGGTG TGCATGCCGC GCCTGCTCGA CCGCCTCAGC
CACAAGGCAC CGGGCATCGG CATCGACATC CGCCACCTCA GCCCCAGCCT GCCGATGGAG
GCGCTGGACA AGGGCGAGCT GGACCTGGTG CTGGGCCGTT TCGACGAGAT GCCGGCGCGT
TTCGCCCGCC GTCACTGGAT GAGCGAGACG CTCAAGCTGG CGGTACGCCG TGAGCATCCG
CTACTGCACC AGCGCAGCCT GGATCTGGAG ACCTTCCTGC GCCTGCGCCA CCTCTGGGTG
CACGGCGGGC AGACCCGCGG CATGGTCGAT CAGTGGCTGG GCGAACAGGG CCTGTCGCGG
CAGATCCTCT ACACCACGCC GAACTACCTG CAGGCGGCGC ACATCGTCGC CGGCAGCGAG
CTGGCGGCAG TGCTGCCCAC CGCCCTGGCC CGGCACTTCG CCACCCTGCT GCCGCTTGAG
CTGTTCGACC TGCCATTCGC CTTGGGCCCC TTCCACCTGG AGATCGTTAG CCTGGCGCAG
CGTCAGCGCG ACGCCGCGCT GCAGTGGCTG ATCGAGGAAA TCGTCGCAGT GGCGTAG
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| Protein sequence | MNFTNFDLNL LRVLDALLRE QNVSRAAEHL ALSQPAVSNA LGRLRELLGD PLLVRVGRRM
QPTPRALALE APIRSALRQL EQSLSAGEAF EPGESRQRFR IAITDYVELV CMPRLLDRLS
HKAPGIGIDI RHLSPSLPME ALDKGELDLV LGRFDEMPAR FARRHWMSET LKLAVRREHP
LLHQRSLDLE TFLRLRHLWV HGGQTRGMVD QWLGEQGLSR QILYTTPNYL QAAHIVAGSE
LAAVLPTALA RHFATLLPLE LFDLPFALGP FHLEIVSLAQ RQRDAALQWL IEEIVAVA
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