Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0316 |
Symbol | |
ID | 5110286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 323506 |
End bp | 326211 |
Gene Length | 2706 bp |
Protein Length | 901 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640501533 |
Product | ABC transporter related |
Protein accession | YP_001185822 |
Protein GI | 146305357 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCGC CGGTCGCCCG CCTGAGCGGT GTCGGCCTGC GCTACGGCCA GACCCGCGCC CTCGACGCCA TCGAGCTGGC GCTGCCGGCG CAGCGCATGG TCGGCCTGAT CGGCCCGGAC GGCGTCGGCA AGTCCAGCCT GCTGGCGCTG ATCGCCGGGG CGCGCAAGAT TCAGGACGGC AGCGTCGAGG TACTGGGCGG CGATATGGCC ACGGCGCACC ATCGCCGCAA CGTCTGCCCG CATATCGCCT ATATGCCGCA GGGACTGGGC AAGAACCTCT ACCCGACGCT GTCGGTGTTC GAGAACCTGG ATTTCTTCGG CCGTCTGTTC GGCCAGGACG CCGCCGAGCG CGAGCGGCGC ATCGACGACC TGCTGCGCAG CACCGGCATG GCCGCCTTCC GCGAGCGCCC GGCGGGCAAG TTGTCCGGCG GCATGAAACA GAAGCTCGGG CTGTGCTGCG CGCTGATTCA TGACCCGGAT CTACTGATCC TCGACGAGCC GACCACCGGC GTCGACCCGC TATCACGCAA CCAGTTCTGG GAGCTGATAG CGCGCATCCG CACGCAGCGC CCGCAGATGA GCGTGCTGGT GGCCACCGCC TACATGGAGG AGGCCGAGCG CTTCGACCAT CTGGTGGCGA TGGATGCCGG CCGCGTGCTG GCCGAAGGCA GCCCGGCCGA ACTGCGCACC CGCACCAGCA GCGCCAGCCT GGAGCAGGCC TTTATCGCCC TGCTGCCCGA AGAACGCCGC CGCGGCCATC AGCAGGTGGT GATTCCGCCC CTGCGAGACA GCAACGAGAT CGCCATCGAA GCCAAGGGCC TGACCATGCG CTTCGGCGAT TTCATCGCGG TGGACGCGGT GTCGTTCCGC ATCCGCCGCG GCGAGATCTT CGGTTTTCTC GGCTCCAACG GCTGCGGCAA GAGCACCACC ATGAAGATGC TCACCGGCCT GCTGCCGGCC AGCGAGGGCG AGGCGCTGCT GTTCGGCCAG GCGGTGGATC CGCGCGACAT GGCCACGCGC AAGCGCGTCG GCTACATGTC GCAGGCGTTC TCCCTGTACG GCGAGCTGAC GGTGCGGCAG AACCTGGTGC TGCATGCCCA GCTGTTCCAT GTGCCGACCG CCGAGATCGA GCCGCGTGTG GCGCAGATGG CCGTGCGCTT CGACCTCGGC GAGGTCATGG ACATGCTCCC CGAGCGTCTG CCGCTAGGCA TTCGCCAGCG CCTGTCGCTG GCCGTGGCGG TGATCCACAA ACCGGAGATT CTGATCCTCG ACGAGCCCAC CTCGGGCGTC GATCCGGTGG CCCGCGACGG CTTCTGGCAA CTGATGCTCG ATCTGTCGCG CCAGGACGGC GTGACCATCT TCATCTCCAC CCACTTCATG AACGAGGCGC AGCGCTGCGA CCGCATCTCG CTGATGCACG CCGGCCGCGT GCTGGACAGC GACACGCCGC AGGGGCTGAT GGAAAAACGC GGGCTGGACA GTCTGGAGGC CACCTTCATC GCCTACCTGC AGGAGGCGGT CGGCGAACAG CCGGTCAGCG AAGCGCCGCC CCTGGAACAG GCCGCTCAGC CGCAGCGTCA GCACTTCAGC CTGCGCCGTC TGCTCAGCTA TGCCCGGCGC GAGGCGCTGG AGCTGCGCCG CGACCCGATT CGCGGCGGCA TGGCCCTGCT CGGTACGGTG TTGCTGCTGT TTATCATCGG CTACGGCATC AGCCTCGATG TGGAGGATCT GAGCTTCGCC GTGCTCGATC GCGACCAGAC CACCACCAGC CAGGAATACC ACCGCAACCT CTCCGGCTCG CGCTACTTCC TGGAGAAGGC GCCGCTCTCC AATTACGACG AACTGGAACG ACGCCTGCGC AATGGCGACA TCAGCCTGGC GGTGGAGATT CCGCCGCACT TCGGCCGCGA CCTCAAGCGT GGCGCCAGCC CGCAGATCGG CATGTGGATC GATGGCGCCA TGCCGACCCG CGCCGAAACC ATCAAGGGTT ACGTCAGCGG CCTGCATCAG CATTACCTGA GCGAGCTGGC GCGCCGCTCG CCGCAGCCGC AGGCGGCCAA CGCCGCCACG CTTGCGGTGC GCTATCGCTA CAACCCGGAC GTGGAGAGCC TCAAGGCCAT GGTGCCGGCG GTGATTCCGC TGCTGCTGAT GCTGATTCCG GCGATGCTCA CGGCCCTCGG CGTGGTGCGC GAGAAAGAGC TGGGTTCGAT CATCAACCTC TACGTCACGC CGGTCACCCG CCTGGAATTC CTGCTCGGCA AGCAGTTGCC CTATATCGGC CTGGGCCTGT TCAACTGCGC CCTGCTGGTG CTGCTGGCGG TCACGGTGTT CGACGTGCCG CTCAAGGGCA GCCCCTTCAC CCTCGCGCTC GGCGTCCTGC TCTATCTGGC CTGCGCCACC GGCCTCGGCC TGCTCATGTC GACCTTCACC AACAGTCAGA TCGCCGCCGT GTTCGGCACC GCCATCGCCA CCCTGGTGCC GGCCATCCAG TTCTCCGGGC TGATCTATCC GGTGGCCTCG CTGGAAGGGA TCGGCGCCCT GGTCGGCCAG CTCTACCCGA CCTCGCAGTT TCTGGTGATC AGCCGCGGGC TGTTCTCCAA GGCGCTGGAG CTGCAGGACA TGCTCGGCTA CTTCGCCGCC TTGCTGCTGA CCATCCCGCT GCTGACTCTG CTCAGCGCCA GTCTGCTGCG CAAACAGGAG GTCTGA
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Protein sequence | MNAPVARLSG VGLRYGQTRA LDAIELALPA QRMVGLIGPD GVGKSSLLAL IAGARKIQDG SVEVLGGDMA TAHHRRNVCP HIAYMPQGLG KNLYPTLSVF ENLDFFGRLF GQDAAERERR IDDLLRSTGM AAFRERPAGK LSGGMKQKLG LCCALIHDPD LLILDEPTTG VDPLSRNQFW ELIARIRTQR PQMSVLVATA YMEEAERFDH LVAMDAGRVL AEGSPAELRT RTSSASLEQA FIALLPEERR RGHQQVVIPP LRDSNEIAIE AKGLTMRFGD FIAVDAVSFR IRRGEIFGFL GSNGCGKSTT MKMLTGLLPA SEGEALLFGQ AVDPRDMATR KRVGYMSQAF SLYGELTVRQ NLVLHAQLFH VPTAEIEPRV AQMAVRFDLG EVMDMLPERL PLGIRQRLSL AVAVIHKPEI LILDEPTSGV DPVARDGFWQ LMLDLSRQDG VTIFISTHFM NEAQRCDRIS LMHAGRVLDS DTPQGLMEKR GLDSLEATFI AYLQEAVGEQ PVSEAPPLEQ AAQPQRQHFS LRRLLSYARR EALELRRDPI RGGMALLGTV LLLFIIGYGI SLDVEDLSFA VLDRDQTTTS QEYHRNLSGS RYFLEKAPLS NYDELERRLR NGDISLAVEI PPHFGRDLKR GASPQIGMWI DGAMPTRAET IKGYVSGLHQ HYLSELARRS PQPQAANAAT LAVRYRYNPD VESLKAMVPA VIPLLLMLIP AMLTALGVVR EKELGSIINL YVTPVTRLEF LLGKQLPYIG LGLFNCALLV LLAVTVFDVP LKGSPFTLAL GVLLYLACAT GLGLLMSTFT NSQIAAVFGT AIATLVPAIQ FSGLIYPVAS LEGIGALVGQ LYPTSQFLVI SRGLFSKALE LQDMLGYFAA LLLTIPLLTL LSASLLRKQE V
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