| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0304 |
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| Symbol | |
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| ID | 5110274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 312428 |
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| End bp | 313075 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640501521 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001185810 |
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| Protein GI | 146305345 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTCA CCCTCTGGGA CATCCTGCGC AACCTGCTTA CCGGCCTGCA GTGGACGCTG
CTGCTGTCGC TGGTGGCCTT CGTCTGCGGC GGCATCGCCG GTCTGCTGGT GATGCTGGCG
CGGCTGTCGC CGCTGGCGGC GCCGCGCATC CTCGCCCGCG GCTATATCGA ACTGTTCCAG
GGCACGCCGC TGCTGATGCA GCTGTTTCTG GTGTTCTTCG GCATCGCCCT GCTCGGCGTC
GACGTATCGC CCTGGCTGGC TGCGGCCACT GCACTGACCC TGTTCACCAG CGCCTTTCTC
GCCGAGATCT GGCGCGGCTG CGTCGAATCG ATCGGCCGTG GCCAGTGGGA GGCCTCCGAA
AGCCTGGCCA TGAGCCGCCT GGAAACCCTG CGCCATGTGG TGCTGCCGCA GGCACTGCGC
ATTGCCGTGG CGCCCACCGT GGGCTTTTCG GTGCAGGTGA TCAAGGGCAC CGCGGTAACC
TCGATCATCG GCTTCACCGA GCTGACCAAG ACCGGCAGCA TGCTGGCCAA CGCCACCTTC
GAGCCGTTCA TGGTCTACGG CTTCGTCGCC CTCGGTTACT TCCTGCTCTG CTACCCGCTC
TCGCTCGCTG CATACCGCCT GGAAAGGAGG CTGAATGTCA CTGCTTAA
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| Protein sequence | MDFTLWDILR NLLTGLQWTL LLSLVAFVCG GIAGLLVMLA RLSPLAAPRI LARGYIELFQ
GTPLLMQLFL VFFGIALLGV DVSPWLAAAT ALTLFTSAFL AEIWRGCVES IGRGQWEASE
SLAMSRLETL RHVVLPQALR IAVAPTVGFS VQVIKGTAVT SIIGFTELTK TGSMLANATF
EPFMVYGFVA LGYFLLCYPL SLAAYRLERR LNVTA
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