| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0279 |
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| Symbol | |
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| ID | 5110249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 287805 |
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| End bp | 288551 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640501496 |
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| Product | two-component response regulator AlgR |
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| Protein accession | YP_001185785 |
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| Protein GI | 146305320 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTCC TGATCGTCGA TGACGAACCC CTAGCCCGCG AGCGCCTGAG CCGCATGGTC
GGTGAGCTCG AGGGTTACCG GGTCCTGGAG CCCGCCGCCA GCAATGGCGA GGAAGCTCTG
ACCCTGATCG ATAGCCTCAA GCCGGATGTG GTCCTGCTGG ATATCCGCAT GCCCGGCCTG
GATGGTCTGC AGGTCGCTGC CAGACTGTGC GAGCGCGAAG CGCCGCCAGC GGTGATCTTC
TGCACGGCTC ACGATGAATT CGCCCTGGAG GCTTTCCAGG TCAGCGCGGT CGGCTATCTG
GTCAAGCCGG TGCGGGCGGA GAATCTCAGC GAGGCGCTGA AGAAGGCCGA GCGGCCCAAC
CGCGTGCAGC TGGCGGCATT GACCCGCCCG GCGGCGGAAA GTGGCGGCGG CCCGCGGACC
CACATCAGCG CCCGCACGCG CAAGGGCATC GAGCTGGTCC CGCTGGATCA CGTGGTCTAC
TTCATCGCCG ATCACAAGTA CGTGACGCTG CGCCACGAGG GCGGCGAAGT GCTGCTCGAC
GAGCCGCTCA AGGCGCTGGA GGACGAGTTC GGCGACCGCT TCGTACGCAT CCACCGCAAT
GCGCTGGTTG CCCGTGAGCG CATCGAGCGC CTGCAGCGTA CGCCGCTGGG GCATTTCCAG
CTGTTCCTGA AAGGCCTGGA CGGCGACTCG CTGGTGGTCA GCCGGCGCCA TGTGGCCGGC
GTGCGCAAGC TGATGCAGTC GCTGTAG
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| Protein sequence | MNVLIVDDEP LARERLSRMV GELEGYRVLE PAASNGEEAL TLIDSLKPDV VLLDIRMPGL
DGLQVAARLC EREAPPAVIF CTAHDEFALE AFQVSAVGYL VKPVRAENLS EALKKAERPN
RVQLAALTRP AAESGGGPRT HISARTRKGI ELVPLDHVVY FIADHKYVTL RHEGGEVLLD
EPLKALEDEF GDRFVRIHRN ALVARERIER LQRTPLGHFQ LFLKGLDGDS LVVSRRHVAG
VRKLMQSL
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