| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0260 |
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| Symbol | |
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| ID | 5106227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 270885 |
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| End bp | 272135 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640501477 |
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| Product | ammonium transporter |
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| Protein accession | YP_001185766 |
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| Protein GI | 146305301 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter
[TIGR03644] probable ammonium transporter, marine subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.647918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAACA CAGCATTGAC TGCATTGCAG TACGGCTTCG ATACCTTCTA CTTTCTGATC
TGTGGTGCCC TGGTGATGTG GATGGCGGCG GGTTTTGCCA TGCTCGAATC CGGCCTGGTG
CGCGCCAAGA ACACCACCGA GATCCTGACC AAGAACGTCG CGCTGTACGC CGTGGCCAGC
GTCATGTACT TGGTGATCGG CTACCACATC ATGTATTCCA GCCCGGAAGG CGGCATCCTG
CCGAGCCTGG GCTTCCTGAT CGGTGACGAG AACACGGCCG AGGCCGTTCT GGCCGGTGGT
GACGACGCCC CCTACTACTC GACCCGTTCG GACTTCTTCT TCCAGGTGGT ATTCGCCGCG
ACCTGCATGT CGATCGTTTC CGGCGCCGTT GCCGAGCGCA TGAAGCTGTG GGCCTTCCTC
GCCTTCGCCG TGGTCATGAC CGGCTTCATC TACCCGGTTC AGGGCTTCTG GAAATGGGGT
TCGGGCTTCC TCAACGAAGC CGGCTTCCTC GACTTCGCCG GTTCCGGCGT GGTGCACATG
GCCGGTGCTT CCGCTGCGCT GGCCGGTGTC CTGCTGCTCG GTGCACGCAA GGGCAAGTAC
GGCTCGAACG GTCAGGTCAA CGCCATTCCT GGCTGCAACC TGCCACTGGC GACCCTGGGT
ACCTTCATCC TGTGGATGGG CTGGTTCGGC TTCAACGGCG GCTCGCAGCT GAAGATGAGC
ACCATCGAGG ATGCCAACGC CGTGGCTCAG GTGTTCGTCA ACACCAACAT GGCCGCCGCC
GGTGGCCTGA TCGCCGCACT GATCGTGGCA CGCATCCTGT TCGGCAAGGC CGACCTGACC
ATGGCCCTCA ACGGTGCCCT GGCCGGCCTG GTGGCCATCA CCGCTGAACC GCTGACCCCG
AGCGCCCTGC AGGCCACCCT GATCGGCGGC GTCGGTGGCG CGCTGGTGGT GTTCTCCATC
CTCGGTCTGG ACAAGGTCAA GATCGACGAT CCGGTCGGCG CCATCTCCGT ACACGGCGTG
GTCGGCGTCT GGGGTCTGCT GGCGGTCTGC CTGACCAACA GCGACGCCAC GCTGGGCGCT
CAGCTGCTGG GCATCGCCAG CATCTTCGCC TGGGTCTTCG TCGCCAGCCT GATCGTCTGG
AGCATCATCA AGGCGGTGAT CGGCCTGCGC GTCAGCGAAG AGGAAGAATA CGAAGGTGTG
GATATCGCCG AGTGCGGTAT GGAGGCCTAC CCGGAATTCA CCAACAAGTG A
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| Protein sequence | MDNTALTALQ YGFDTFYFLI CGALVMWMAA GFAMLESGLV RAKNTTEILT KNVALYAVAS
VMYLVIGYHI MYSSPEGGIL PSLGFLIGDE NTAEAVLAGG DDAPYYSTRS DFFFQVVFAA
TCMSIVSGAV AERMKLWAFL AFAVVMTGFI YPVQGFWKWG SGFLNEAGFL DFAGSGVVHM
AGASAALAGV LLLGARKGKY GSNGQVNAIP GCNLPLATLG TFILWMGWFG FNGGSQLKMS
TIEDANAVAQ VFVNTNMAAA GGLIAALIVA RILFGKADLT MALNGALAGL VAITAEPLTP
SALQATLIGG VGGALVVFSI LGLDKVKIDD PVGAISVHGV VGVWGLLAVC LTNSDATLGA
QLLGIASIFA WVFVASLIVW SIIKAVIGLR VSEEEEYEGV DIAECGMEAY PEFTNK
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