| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0240 |
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| Symbol | |
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| ID | 5106207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 248995 |
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| End bp | 250416 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640501457 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001185746 |
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| Protein GI | 146305281 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTCT ACCTGAACCT CGCCGAAGAA CTGGCCGCCC GCATCGAGCA GGGGCTGTTC
CGTCCCGGTG AACGTCTGCC TTCGGTGCGC ACCCTGAGCC AGGAGCACGG CGTCAGCCTC
AGCACCGTAC AGCAGGCCTA CCGCCAGCTG GAGGATCAGG GCCTGGCCAC GCCACGGCCG
AAGTCCGGTT ATTTCGTCAA CCAGCTGCGC CAGCAGCCGG AGCTGCCGCA GATCAGCCGC
GCGCCGCAAC GCCCGGTGGA GGTCTCGCAG TGGGAGCAGG TGCTGGAGCT GGTCAGCGAG
CCGCCCAGCA GCGACGTGCT GCAGCTCAGC CGGGGCATTC CCGACATCGA CGTGCCCACG
CTCAAGCCGC TGCTGCGCAG CCTGTCGCGA CTGAGCCGAC GACAGAGCCT GCGCGAGCTG
AGCTACGGAG CGGTCGAGGG GGAAATCAGC CTGCGCCAGG AAGTCGCCCG CCTGACGCTG
GACTCCGGCT GCCAGCTGGC CGCCGAGGAC ATCGTCATCA CCACCGGCTG TCATGAGGCG
CTGTCGGCGG CGCTGCGCGC CATCTGCCAG CCCGGCGACA TCGTCGCGGT GGATTCGCCG
AGCTTCCACG GGGTGATGCA GGCGCTCAAG GGCTTCGGCA TGAAGGCCCT GGAACTGCCC
ACCGACCCGC TTACCGGAAT CAGCCTGGAG GCTTTGGAGA TGGCCCTGGA GCAATGGCCG
ATCAAGGCCA TCCAGCTCAC CCCCAGCTGC AACAACCCGC TCGGTTACGT GATGCCGGAA
GCCAACAAGC GCGCCCTGCT GGCGCTGGCG CAGCGCTTCG ACGTGGCGAT CATCGAGGAC
GATATCTACG GCGACCTCGC CTATCACTAC CCGCGCCCGC GCAGCATCAA GTCGTTCGAC
GAGGACGGTC GCGTGCTGCT GTGCAGCTCC TTCTCCAAGA CCCTGGCGCC CGGCCTGCGC
ATCGGCTGGA TCGCCCCCGG CCGCTACCTG CAGCAGGTGC TGCACATGAA GTACATGGGC
ACCGGGATGA GCGCCCAGCT GCCGCAGCTG GCGATCGCCG AATTCATTCG CGACGGCCTG
TACCAGCCGC ACCTGCGCCA GATGCGCAAA CAGTACGCCC GCGGCCGCGA ACAGATGACC
GGTTGGGTCA GCCGCTATTT TCCGCCGGGT ACTCGGGTCA GCCAGCCGCA GGGCGGCTTC
ATGCTCTGGG TGGAGATGCC GCAGGGCTTC GACAGCCTGC GCCTCAATCG CCGCCTGGCC
GCATCCAAGC TGCAGGTGGC GCCCGGCAGC ATCTTTTCCG CAGCGGGCAA GTACCGCAAC
TGCATCCGCC TGAACTTCGC CTGCAGCCAT CAGCCGAGCA TGGAGGCGGC GATTCGTCAG
GTCGGCGAAA CCGTTACCCT GCTGCTGGCC GAAGACGCCT GA
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| Protein sequence | MTLYLNLAEE LAARIEQGLF RPGERLPSVR TLSQEHGVSL STVQQAYRQL EDQGLATPRP
KSGYFVNQLR QQPELPQISR APQRPVEVSQ WEQVLELVSE PPSSDVLQLS RGIPDIDVPT
LKPLLRSLSR LSRRQSLREL SYGAVEGEIS LRQEVARLTL DSGCQLAAED IVITTGCHEA
LSAALRAICQ PGDIVAVDSP SFHGVMQALK GFGMKALELP TDPLTGISLE ALEMALEQWP
IKAIQLTPSC NNPLGYVMPE ANKRALLALA QRFDVAIIED DIYGDLAYHY PRPRSIKSFD
EDGRVLLCSS FSKTLAPGLR IGWIAPGRYL QQVLHMKYMG TGMSAQLPQL AIAEFIRDGL
YQPHLRQMRK QYARGREQMT GWVSRYFPPG TRVSQPQGGF MLWVEMPQGF DSLRLNRRLA
ASKLQVAPGS IFSAAGKYRN CIRLNFACSH QPSMEAAIRQ VGETVTLLLA EDA
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