Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0212 |
Symbol | flgH |
ID | 5106179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 214052 |
End bp | 214714 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640501428 |
Product | flagellar basal body L-ring protein |
Protein accession | YP_001185718 |
Protein GI | 146305253 |
COG category | [N] Cell motility |
COG ID | [COG2063] Flagellar basal body L-ring protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.144203 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGCC TGATCCCGCT TGCCCTGCTG CTGACCCTGG GTGGCTGCGC CAGCTTCAAC GAGATGCTGC CCGACGAGGA CTCCAGCCAC TACGAGCCGC TGGCGCTGGA CTACAGCCAG CCGCCCACCA CCAGCGGCGG CCTGTTCCGC AGCGGCTACA GCGGCTCGCT GGTCGGCGAC AAGCGCGCGG TGCGGGTCGG CGACATCCTC ACCGTGGTGC TGGACGAATC CACCCAGTCG AGCAAAAGCG CCGGCACCAG CTTCGGCAAG AGTTCCGGAG TGTCCGTGGG CATTCCCACC GTGCTGGGCA AGCAGTACGA CCAGCTGGAA AGCTCCGCCG AGGCCGAGCG CGATTTCAAG GGCTCGGCGC GCAGTTCGCA ACAGAACACC CTGCGCGGCT CCATCGCGGT GACCGTGCAT CAGGTGCTGC CCAACGGCAC CCTGCTGATC AAGGGCGAGA AGGCCCTGCG TCTGAACCAG GGCGACGAGT ACATCCGCCT GGTCGGCCTG GTGCGGGTCG ACGACATCAA CCGCAGCAAC CAGGTGTCCT CGCAGAACGT GGCCAACGCG CGCATCTCCT ACGCCGGCCG CGGCGTGCTC AACGACAGCA ACTCGGCGGG CTGGCTGACG CGCTTCTTCA CCCACCCGAT CTTTCCGCTC TGA
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Protein sequence | MKRLIPLALL LTLGGCASFN EMLPDEDSSH YEPLALDYSQ PPTTSGGLFR SGYSGSLVGD KRAVRVGDIL TVVLDESTQS SKSAGTSFGK SSGVSVGIPT VLGKQYDQLE SSAEAERDFK GSARSSQQNT LRGSIAVTVH QVLPNGTLLI KGEKALRLNQ GDEYIRLVGL VRVDDINRSN QVSSQNVANA RISYAGRGVL NDSNSAGWLT RFFTHPIFPL
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