| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0178 |
|---|
| Symbol | |
|---|
| ID | 5106858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 179167 |
|---|
| End bp | 179601 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640501394 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001185684 |
|---|
| Protein GI | 146305219 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02284] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCA AGACCGCACA ACTCAACGAA CTGATCGAAA TTACCCGCGA CGGCAAGCGC
TTCTACGAGC ATGCCCACGA CGAGGTCAAG GACATCCGCC TGCAGGCGCT GTTCCGCGAC
ATGGTGCGGG CCAAGACCGA GGTGATCGAC GCCCTGAGCG TCAAGGTGGC CGCCAACCAG
GCCGACCCGG CGAGCGGCGG CACCCTGCTG GGCAAGCTGC GCCAGCTCTA CGCCGATACC
CGCGCCACCC TGTCCAAGGA CGAGGACGCC GCCTACGTGG CCCAGCTGGA AGAGGCCGAA
GACCGCATCC TGCATGCCTT CGAGGATGCG CTGGAAAGCG CCGACCAGGA CGTGCGGGTA
CTGCTGGCGG TGGAGATGCC CAAGGTGCGC GCCTGCCATG ACCGCATGCG TGCGCTGAAG
CAGAACATGC AGTAA
|
|---|
| Protein sequence | MSSKTAQLNE LIEITRDGKR FYEHAHDEVK DIRLQALFRD MVRAKTEVID ALSVKVAANQ
ADPASGGTLL GKLRQLYADT RATLSKDEDA AYVAQLEEAE DRILHAFEDA LESADQDVRV
LLAVEMPKVR ACHDRMRALK QNMQ
|
|---|
| |