| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0136 |
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| Symbol | |
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| ID | 5106816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 137521 |
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| End bp | 138510 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640501352 |
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| Product | asparaginase |
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| Protein accession | YP_001185642 |
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| Protein GI | 146305177 |
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| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
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| TIGRFAM ID | [TIGR00519] L-asparaginases, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACCC CAGAAAACCT GCTGGTGCTT TACACCGGCG GGACCATTGG CATGCAGATG
AGCGCGGACG GCCTGGCTCC GGCTTCCGGC TTCGAGGCGC GCATGCGTGC CCAGCAGGCC
AGCGAGAATA CCGGCGAGCT GCCGAACTGG CAGTTCCGCG AGCTGCTGCC GCTGATCGAC
AGCGCCAACA TGAACCCCGG CCACTGGCTG GCCCTACGCG ACCAGATCGT CGCCGCGGTC
GAGCAGGAGG GGCACGACGC CGTACTGGTG CTGCATGGCA CCGATACCCT GGCCTACAGC
GCCGCGGCGC TGAGCTTCCT GCTGCTCGGC CTGGACGTGC CGGTGCTGCT CACCGGCGCC
ATGCAGCCGG CCGGCGTGGC GGGCGGCGAT GCCTGGCCCA ATCTGTTCGG CGCGTTGCGC
GCATTGCACC GCGGCGTGCA GCCGGGCGTG CACCTGTACT TCAACGGCCA GCTGCTGCAT
GGCGTGCGCT GCTCCAAGCT GCGCAGCGAT GCCTTCGACG CCTTCCAGGT GCTGCCGCGC
CTGCGCCAGG CCGAGCGCGC CGCCATCGAT GCGCGCATCG ACTATCGCCA GCCGCGGCAG
GCGGCGAACC TGGCGGTGCT GCCGCTGCAT CCGGCGCTGC AGGCGTCGCA CCTGCGCGCC
CTGCTGGAAA GCGGCATACA GGGCTTGCTG CTGGAATGCT ACGGCAGCGG CACCGGCCCG
GCCGGCGATG CCGAGCTGAT GGCCGTCCTG CACGAGGCGC ACGCGCGCGG CGTGGTGCTG
GCGGCGATCA GCCAGTGCCC GCAGGGGCAC GTGCAGTTCG GCGTGTACGC CGCCGGCAGC
CGACTGGCCG AGGCCGGACT GGTGTCCTGC GGCGGCATGA CCCGCGAGGC GGCGCTGGGC
AAGCTGTTCG CCCTGCTCGG CGCCGGGTTG ACGCAGGCCG AGGTCGAACA CTGGCTGGCG
CGCGATCTCT GTGGTGAGAT GAGCGACTGA
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| Protein sequence | MATPENLLVL YTGGTIGMQM SADGLAPASG FEARMRAQQA SENTGELPNW QFRELLPLID
SANMNPGHWL ALRDQIVAAV EQEGHDAVLV LHGTDTLAYS AAALSFLLLG LDVPVLLTGA
MQPAGVAGGD AWPNLFGALR ALHRGVQPGV HLYFNGQLLH GVRCSKLRSD AFDAFQVLPR
LRQAERAAID ARIDYRQPRQ AANLAVLPLH PALQASHLRA LLESGIQGLL LECYGSGTGP
AGDAELMAVL HEAHARGVVL AAISQCPQGH VQFGVYAAGS RLAEAGLVSC GGMTREAALG
KLFALLGAGL TQAEVEHWLA RDLCGEMSD
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