| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0125 |
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| Symbol | |
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| ID | 5106310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 125368 |
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| End bp | 126345 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640501341 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001185631 |
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| Protein GI | 146305166 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTCA CGGTGGTGAT GGCCGAGCGC TGCTCGGCCA CCAGCGTCTC GGCGGCGCTG
GAGTTTCTCG AATGCGCCAA CGTGCTGCAG CGCTTTCTCA CCGGCGACCC GGCGGCGACG
CCGTTCGAGG TGCACAGCGC CTCCCTCGAC GGCGCCCCGG TCGAGTGCAC CGGCGGCCTG
CGCCTGACCC CGCAGCGGGC GCTGAGCGAG GTGCCGCACA GCGATCTGGT GATAGTGCCC
GGCTTCATGT TCAACATCCT CGCCGTGCTG CCGGCCCTGG AGCCGCTGAG CGCCTGGCTG
CGCGAGCGCC ATGCGCAGGG CAGCTACATC GCCAGCATGT GCACCGGCAC CTTCGTCACC
GCCCAGGCCG GCCTGCTCGA CGGTCGCCGC GCCACCACCC ACTGGATCTT CAGCGAGCAG
TTCGCCCGGC GTTTTCCGCG GGTGCTGCTG CAGGCCGAAC GCAGCGTCAC CGACGACGGC
CAGCTGCTGT GCTCGGCCGG CTCCACCACC GGCAGCGACC TGCTGCTGCA CATCATCCGC
CGCTTCGCCT CGCCGCAGCT GGCCATCGAG TGCTCGAAGA AGCTCCTGGT CGACAGCGCC
GAGCGCCTGC AGACGCCCTA CATGAGCGCC TCGTTCAACA AGACGCATCA GGACGCCGAG
GTGCTCAGGG TGCAGATCTG GCTGGAGAAG CACAGCGCCG AACGCATCGT CCTCGACGAG
GTCGCCGCGC GCTTCGCCCT GAGCCCGCGC AATCTGATCC GCCGCTTCAA GGACGCCACC
GGGCAGACGC CGGTGCAGTA CCTGCAGAAC CTGCGACTGG AGCGGGCCAA GCACCTGCTG
GAGGCCAGCC AGGAAAACTT CGAGCGCATC ACCCAGCAGG TCGGCTACGA GGACGGCAGT
TCCTTCCGCC GCCTGTTCAA GGAACGCGTC GGCCTGTCGC CGGGCGCCTA CCGGCGACGC
TTCAACCGCC CTACCTGA
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| Protein sequence | MKVTVVMAER CSATSVSAAL EFLECANVLQ RFLTGDPAAT PFEVHSASLD GAPVECTGGL
RLTPQRALSE VPHSDLVIVP GFMFNILAVL PALEPLSAWL RERHAQGSYI ASMCTGTFVT
AQAGLLDGRR ATTHWIFSEQ FARRFPRVLL QAERSVTDDG QLLCSAGSTT GSDLLLHIIR
RFASPQLAIE CSKKLLVDSA ERLQTPYMSA SFNKTHQDAE VLRVQIWLEK HSAERIVLDE
VAARFALSPR NLIRRFKDAT GQTPVQYLQN LRLERAKHLL EASQENFERI TQQVGYEDGS
SFRRLFKERV GLSPGAYRRR FNRPT
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