| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0076 |
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| Symbol | |
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| ID | 5106261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 71892 |
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| End bp | 72869 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501292 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001185582 |
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| Protein GI | 146305117 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTTC TGATCACCGG CGCAGCCGGC TTCATCGGCC ACCAACTGCT CGACGAACTG
GCCATTCAGC ATCCGCAATG GACGCTGATC GCCGCCGATA TCCGCGCGCT CGACAGTCGC
GGGCTGAAAG CCAACGTCGA GCCGGTGTTG CTGGACATGG GCCGCCCCGC GCAGGTGCGG
GCCTGCGTTG CCGGCTGGAA GCCGGACGCC ATCGTCCACC TGGCCACCGT GATACGGCCA
CCGCGCGACA TGAGCGAAGC ACATCTGCAC GCCATCGAAG TGGGCGGCAC CCAGTGCCTG
GTGGACAGCG CCATCGCCAA CGGTGTGCGC CAGCTGATCG TCACCAGCTC CGGCGCCGCC
TATGGCTATG CCCCCGAGAA TGCCGAGTGG ATAGACGAGA ATCAGCCGCT GCGTGGGCAC
CCGCATTTCG TCTACGCCAG GCACAAGCTG GAGATCGAGC AGCTGTTGGC GCGCAGCCGC
GCCCAGCATC CGCAGCTGCA TCAGCTGATC CTGCGTCCCG GCACCATTCT CGGCCGCCGT
CTGAACAACC CGATCAGCGA CCTGTTCAAG AAACGCGCCG TGCTCGGCGT CCGCGGTCAT
GACAGCCGCT TCGTGTTCAT CTGGGAGCAG GACGTGGTCG GCATCATCCG CCAGGGGCTG
GAGACCGCTC GCGAAGGCAT CTACAACCTG GCCGGCGATG GCGCCCTGAG CCTGGCGGAG
ATCGCCGAGA TTCTCGGCAA ACCCTACCGG CCCGTGCCGG CCACGCTGCT GGCCGCTGCG
CTGCGCCTGC TCAAGCCGCT GGGGCTGAGC CAGTACGGCC CGGAGCAACT GGACTTTCTG
CGCTACCGGC CGGTGCTGGC CAACCAGCGG TTGAAGGAGG AGTTCGGCTA TCAGCCGCGC
TACACCAGCC GCGAAGCCTT TCTCGCCTTC CTCAACGCAC AGGGCATCAG CTACCGCTCA
GGCGAAAGCC GACCTTGA
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| Protein sequence | MRVLITGAAG FIGHQLLDEL AIQHPQWTLI AADIRALDSR GLKANVEPVL LDMGRPAQVR
ACVAGWKPDA IVHLATVIRP PRDMSEAHLH AIEVGGTQCL VDSAIANGVR QLIVTSSGAA
YGYAPENAEW IDENQPLRGH PHFVYARHKL EIEQLLARSR AQHPQLHQLI LRPGTILGRR
LNNPISDLFK KRAVLGVRGH DSRFVFIWEQ DVVGIIRQGL ETAREGIYNL AGDGALSLAE
IAEILGKPYR PVPATLLAAA LRLLKPLGLS QYGPEQLDFL RYRPVLANQR LKEEFGYQPR
YTSREAFLAF LNAQGISYRS GESRP
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