Gene Pmen_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0043 
Symbol 
ID5106717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp42137 
End bp42673 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content64% 
IMG OID640501259 
Producthypothetical protein 
Protein accessionYP_001185549 
Protein GI146305084 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTG AACACGCAGC GCGCCCTCAG CTGATGCAAA CCCTGCAGCA GGGTGCAGCC 
CCACAGGGCA ACCTGGCTGC ACTCAAGGAG ACGGGCTGGT CACGACGCAG CGATTTCGAG
TCGAGCCTGT CGAGTTGGTC GAACAGCGCA GTGCCCACCC TGGCCGATGG GCAGCTGTTC
GCCCAGTTGA TTCAGCCCGT TCATTCAGGT GGCGATCAAT CCGGTTTTGG CGGCAGCGGC
GTTGCATCGT TTCAGGCTCG GCCCGATGGC ATGGCGGGAG AGCTGGTCGA TGAGCTGACG
CAGCGTCTAC CCAGCCTGCC GAGCGGCCCG ATCAACGTCA CCCTGTTGAT GCCGAACCTG
GGCCGGGTAC AGGTGCGCGC GGGCAAGCGC GACCAGCAAC TGGAAGTGGA GCTGGGCTTC
GAGCGGCAGG ATGTGCTGGA GCGTCTGCGC GCGCAGGAAC GCACCTGTGA AAGCGCGTTG
GGCGAAGCGC TTGGTCAGCC TGTGCGCTTA TGGATGCGTG AAGAGGCGAG CGTATGA
 
Protein sequence
MKTEHAARPQ LMQTLQQGAA PQGNLAALKE TGWSRRSDFE SSLSSWSNSA VPTLADGQLF 
AQLIQPVHSG GDQSGFGGSG VASFQARPDG MAGELVDELT QRLPSLPSGP INVTLLMPNL
GRVQVRAGKR DQQLEVELGF ERQDVLERLR AQERTCESAL GEALGQPVRL WMREEASV