Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0043 |
Symbol | |
ID | 5106717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 42137 |
End bp | 42673 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640501259 |
Product | hypothetical protein |
Protein accession | YP_001185549 |
Protein GI | 146305084 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTG AACACGCAGC GCGCCCTCAG CTGATGCAAA CCCTGCAGCA GGGTGCAGCC CCACAGGGCA ACCTGGCTGC ACTCAAGGAG ACGGGCTGGT CACGACGCAG CGATTTCGAG TCGAGCCTGT CGAGTTGGTC GAACAGCGCA GTGCCCACCC TGGCCGATGG GCAGCTGTTC GCCCAGTTGA TTCAGCCCGT TCATTCAGGT GGCGATCAAT CCGGTTTTGG CGGCAGCGGC GTTGCATCGT TTCAGGCTCG GCCCGATGGC ATGGCGGGAG AGCTGGTCGA TGAGCTGACG CAGCGTCTAC CCAGCCTGCC GAGCGGCCCG ATCAACGTCA CCCTGTTGAT GCCGAACCTG GGCCGGGTAC AGGTGCGCGC GGGCAAGCGC GACCAGCAAC TGGAAGTGGA GCTGGGCTTC GAGCGGCAGG ATGTGCTGGA GCGTCTGCGC GCGCAGGAAC GCACCTGTGA AAGCGCGTTG GGCGAAGCGC TTGGTCAGCC TGTGCGCTTA TGGATGCGTG AAGAGGCGAG CGTATGA
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Protein sequence | MKTEHAARPQ LMQTLQQGAA PQGNLAALKE TGWSRRSDFE SSLSSWSNSA VPTLADGQLF AQLIQPVHSG GDQSGFGGSG VASFQARPDG MAGELVDELT QRLPSLPSGP INVTLLMPNL GRVQVRAGKR DQQLEVELGF ERQDVLERLR AQERTCESAL GEALGQPVRL WMREEASV
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