3 homologs were found in PanDaTox collection
for query gene Pmen_0043 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009439  Pmen_0043  hypothetical protein  100 
 
 
178 aa  356  9.999999999999999e-98  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_1211  type III secretion protein HrpP  50.4 
 
 
190 aa  115  3e-25  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.111608  normal  0.541783 
 
 
-
 
NC_004578  PSPTO_1398  type III secretion protein HrpP  43.75 
 
 
189 aa  105  3e-22  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.341276  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>