| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_2025 |
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| Symbol | trmE |
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| ID | 3746072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium luteolum DSM 273 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007512 |
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| Strand | - |
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| Start bp | 2252352 |
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| End bp | 2253773 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637770056 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_375910 |
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| Protein GI | 78187867 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.208875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCAT CTGTCGTACT TCAGCAGCCC GATATCCCGA TAGCCGCAAT CGCCACGCCG
GTGGGGGTCG GGGCGCTCGC CATTGTCCGG ATGAGCGGGA AAGGCGTCTT CGGTATTGCT
GACAGGGCGT TCAGGAAAAA AAGCGGGAAG GCGTTCAGTT TCGAGGCGGC TGAAGGGTTC
ACTGCCCATG TGGGTACGCT TTTTGATGGT GAGGGGATGG TCGACGAGGT CGTTGCGCTC
GTCTTCCGGG CCCCCTCGTC GTTCACCATG GAGGATATGG TCGAGTTTAC CTGTCATGGC
GGGCCCGTTG TGGTTCGCCG GGTGCTCGCC GCGCTGCTTG ACGGGGGGTG CCGGCTCGCC
GAACCCGGAG AGTTCACCCG GCGCGCCTTC CTCAACGGCC GCATCGACCT TTTGCAGGCC
GAAGCCATCG GCGAGATGAT CCACGCCCGT ACCGATGGGG CATTCCGCAC GGCCGTGACG
CAGATGCAGG GCGGCCTTTC GCGCCGCCTA CTGGAGATGA GGGAGGGGCT CCTGCAGTCC
TGCGCCCTCC TTGAGCTCGA ACTCGACTTC AGCGAAGAGG ACGTGGAGTT CCAGAGCCGG
GAGGAACTCA GGGGCGAAGT TATCCGGCTC CAGACGGAGC TTTCAGGCCT TGTCGATTCC
TATCAGCATG GCAGGCTGCT CTCGGAAGGG GTCTCTACCG TTATCGCCGG CCGCCCGAAC
GCCGGCAAGT CCACCCTCCT CAACAAGCTG CTCGGAGAGG AGCGCTCCAT CGTCAGCCAC
ATGCCGGGCA CTACGCGGGA CTATATCGAA GAGTGCTTCG TTTACGACAA GACCATGTTC
CGACTTACCG ACACCGCCGG CCTTAGGGAG TCAGAGGAAG ATGTGGAGCA CGAAGGCATA
GAGCGAAGCT ACCGCAAGAT ATCCGAGGCG GATCTCATCC TTTACATGCT CGATGTGTCG
GGGGAGGGGT TCCGTGAGGA GGCTGTGTCT GCCGCGGCGC TCTGCGCCGG GCACCCTGAA
GCCCGGATGA TCCTCCTTGC CAACAAGACC GATCTCGTAA AGGACTCCGC CCTGCGAATT
GCTGCCCTGG AGACTGCCGC AGGCAGCCCG GTCGTTCCCA TGGCGGCACG GAGCGGCGAA
GGGATCGAGG AACTCAAACT CCTTATGGCA TCCATGGTCG AAGGGCTCGA CAAGCTCCAT
GAAGCCAGCG TGCTCGTCAC CAGCCTCCGC CACTACGAGG CCCTCCGCAA CGCTTCGGAT
GCACTCCATA ACGCCCTCGG ACTGATAGAG GGCGGTGAGG CTACAGAACT TATCGCCTTT
GAGCTCCGTT CCGCACTCGA TTATGTCGGA GAAATCACGG GAAAGGTTGT CAGTGAAGAA
CTGCTGAATA CGATATTCGG GCAGTTCTGC ATCGGAAAGT AG
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| Protein sequence | MPASVVLQQP DIPIAAIATP VGVGALAIVR MSGKGVFGIA DRAFRKKSGK AFSFEAAEGF
TAHVGTLFDG EGMVDEVVAL VFRAPSSFTM EDMVEFTCHG GPVVVRRVLA ALLDGGCRLA
EPGEFTRRAF LNGRIDLLQA EAIGEMIHAR TDGAFRTAVT QMQGGLSRRL LEMREGLLQS
CALLELELDF SEEDVEFQSR EELRGEVIRL QTELSGLVDS YQHGRLLSEG VSTVIAGRPN
AGKSTLLNKL LGEERSIVSH MPGTTRDYIE ECFVYDKTMF RLTDTAGLRE SEEDVEHEGI
ERSYRKISEA DLILYMLDVS GEGFREEAVS AAALCAGHPE ARMILLANKT DLVKDSALRI
AALETAAGSP VVPMAARSGE GIEELKLLMA SMVEGLDKLH EASVLVTSLR HYEALRNASD
ALHNALGLIE GGEATELIAF ELRSALDYVG EITGKVVSEE LLNTIFGQFC IGK
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