Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plut_2001 |
Symbol | |
ID | 3744266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium luteolum DSM 273 |
Kingdom | Bacteria |
Replicon accession | NC_007512 |
Strand | - |
Start bp | 2229749 |
End bp | 2231086 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637770032 |
Product | LipD protein, putative |
Protein accession | YP_375886 |
Protein GI | 78187843 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.538795 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTAT CCAAGGCGCT CGCCGCTTTT CTGGTTGCGG CATCTCTTTC AACCCCTTCC GGGGCGGAGG CTGCGGCAAA GACGCTGAAA CTTTCCCTCA AGGAGGCCAT CTCGATGGCC CGCGAGAACA ACTCCACCAT CAAGGCGGCC CGGAGCCGCG TGGACCAGGC CGAAGGGCGG ATCGTGCAGA GCCGCAAATC CTACCTGCCA ACCGTTACCC TTTCTGAAAA CTTCGTACGC ACCAACGATC CGCTCAATGT GTTCGGCATC AAGCTCATGC AGACAAATGT TGTTGCAGGT GATTTGTTCA ATATGAATAC AATGGCGGTG AGCGATAAGC TCAACGAGGC CGATCCCATC AGCGACTTCA ACACATCGCT GCAGCTCATG CAGCCGATTT TCAACCGTGA TGGCGCAATC GGTCGCGGCA TGGCCAGGAA GGCCAAGGTC GCCGAGCAGT ACATGACCGC GCGTACTGAA GAAACTATTG AGCTCTACGT CAGCAAGGCC TATTACGGCA TGATGCTGGC CCTGCGCAAT ATCACGGCCA TCGACCAGTC GATCGCCACC ATGCAGCGCC ACAGCAGCGA AGCCGGCAGG GCATTCAATG CCGGCATGCT TCCCAAGTCC GACAAGCTCT CCACCGATGT CCGCCTGGCT GAGCTCCGCG AGCAGAAGCT GATGCTTCAG GACGGCGTGA AGGAGGCCAA AGACGCCCTT CGCGTCCTGC TCAACCTTGA GGCCGATGTC AATATCGAGC CGACCGGCAC CTTCGCTGTG GATGCTGCGC TTCCCTCTCT CAAGGCATCT TCTACCCGTT CCGATCTCAT GGCGATGGAG ACCTACCGTC AGCTTGCTGA AGAGCAGGGC GAGATGGCCA GCGCCGCCCG CCTCCCCCGC CTCAACGCAT TCGCCCGCAC CGATCACCAT ACCGCCGACT TCGACAAGGA CGGCTCGAGC TGGATGGTCG GCCTGAACAT GCAGTGGCAG ATATTCGATG GCATGGCTGT TTCCGGCAAG GTGCAGGAGG CCAAGGCCCG CGAACGTGAG GCCCGCTATA GTTACGAGGC TGCCAAGAGC AACAGTGCTG CCGAGGTTGC AAAGGCCCTC CGCTCGATGA AGACCGCAAA AGAGCGGATC GCGGTCGCTG GCCAGTCGCT TGACGGGGCA AAGGTAAGCC TTGACTACAT CGGCGAGCAG TACCGCACCG GCAAGGCCAT GACCTTCGAG CTTCTTATGC GTGAGGGTGC ATATACCTAC GCCAAGATGA GGCTGAACCA GGCGAAATAC GACTACGCTG TAGCGAAAAG CGAACTGGCT TATTACGGGG CGAAATAA
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Protein sequence | MKVSKALAAF LVAASLSTPS GAEAAAKTLK LSLKEAISMA RENNSTIKAA RSRVDQAEGR IVQSRKSYLP TVTLSENFVR TNDPLNVFGI KLMQTNVVAG DLFNMNTMAV SDKLNEADPI SDFNTSLQLM QPIFNRDGAI GRGMARKAKV AEQYMTARTE ETIELYVSKA YYGMMLALRN ITAIDQSIAT MQRHSSEAGR AFNAGMLPKS DKLSTDVRLA ELREQKLMLQ DGVKEAKDAL RVLLNLEADV NIEPTGTFAV DAALPSLKAS STRSDLMAME TYRQLAEEQG EMASAARLPR LNAFARTDHH TADFDKDGSS WMVGLNMQWQ IFDGMAVSGK VQEAKARERE ARYSYEAAKS NSAAEVAKAL RSMKTAKERI AVAGQSLDGA KVSLDYIGEQ YRTGKAMTFE LLMREGAYTY AKMRLNQAKY DYAVAKSELA YYGAK
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