Gene Plut_1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlut_1540 
Symbol 
ID3745166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium luteolum DSM 273 
KingdomBacteria 
Replicon accessionNC_007512 
Strand
Start bp1731069 
End bp1733261 
Gene Length2193 bp 
Protein Length730 aa 
Translation table11 
GC content54% 
IMG OID637769576 
ProductTonB-dependent receptor, putative 
Protein accessionYP_375440 
Protein GI78187397 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTTC TGCTCGCAGC AACGGCCCAA GCCGCTGAAA CAGCACCAGA CAGCACCGTC 
ATCCGCTTTA CCTCCGAGGA AATCACCGTA TCAGGCCAGA AGGGAGATAT CCTGCAGCAG
GTAACCGGCA GCGAATCGGC CGTACTGAAC CCCTCGCAGA TGTCCGTCTA CAAGGTCATC
AACATGATGC CATCCCTCAG CCAGCAGAGC GTCGACCCAT ACGGGCTCGC CGACATATCC
AACTACCATG AGGCATTCAA GTTCCGTGGA GTTGAGGCTA CGGCCGGCGG CGTGCCGTCC
ACTACGGCCA ATGTTGAAGG ACTTCCCGTC ACCGGCAGAC CGGGGGGAGG AGCGACCATC
TACGATCTTG AGAACATGCA GAACATCACC ATCTACACCG GCGTCATGCC GGCAAACAAG
GGACTCGGGC TTTCCACTGT CGGGGGCAAG ATTGACATGG AAATCAAGCG ACCTACCGAT
ACGTTTGGTG TTGATGTGAA GCAGACCGTC GGCAGCAACG ACTTCAGCCG CACCTATCTG
AGGGTTGATA GCGGCGAGCT CGGAAGTGGG CTGAAGGCAT TCGTTTCGGG ATCGACGAGC
TATGCCGACA AGTGGAAAGG CGAAGGATCG AGCAACCGCA ACAACCTCAT GTTCGGGATC
TCGGAAACCT TCAGCGACAG GGTGAAGCTT GAAGCATTCC TTACATACAG CAAAGGGCTG
ATCCATCCCT ACCGCGCACT CAGCTATGCC GAAATCAGCA ACCTCGAAAC CGCCTATAGC
AAGGACTACA GCACAGACCC CACCAGCGTC TGGCACTACG ACTACAACAA GAACGAGTTT
GAGGACTGGA TGGTGATGGC CAACCTGGAA ATCAAAACCG GGGACAGCTC GAAGCTGAAC
ATCAAACCCT ACTACTGGAG CGACAAGGGG TATTACATGG AAACCATAAC ACCAACACCG
GGAACGAACC TCGTCCGGGA GTGGGACGTC GAGCATGACC TTAAAGGGCT ACTCGCTGAA
TACTCAACAA AACTCGGTGA TATCGATCTT GATTTTGGAT ACCTATTCCA CACTCAGGAA
CGGCCGGGAC CTCCCTCCTC ATGGAAGAAC TACACCGTAT CCACTGCAGG GGACCTTGTA
TTCAAAAACT GGTCTATCCT CTCGAACACC TCCAGCCACG AACTGCACGA ACCCTTCATT
GAGGCAAAGT ACAGCACAGG GAACTATCGT ATTGAGGGCG GCCTGAAGTA TGTCAACTAC
ACCCTGCCGT CGATCATCAC ATATGACATG GCGGCCGTTG ACGTAAGCTA CGACGAGGCT
CTCGCCTCGA ACCCGTCAAT AGACGCATCA AGAAGCGCAA CAGCAGCAAA AACCTTCAGC
CGCGTCTTTC CAAACCTGAC GCTGACGAGG TTCATCAATG ATGACACATC GATTCACCTC
GCCTACGGAG AAAACTATGT CACCCATGTC GACATCTATC CCTACTTCAT CTCCAATGCC
AAAAATTTCA TAACCAACGG CATCACCTTC CAGGAGCTCT GGGACGCCCG CGAAATGGAG
ACAGCACAGA ACTTCGAGCT TGGCATGAAG ATGAAGGGCA CCAACTGGAG CCTCGCCCCG
ACCATCTATT ATGCCATCCA CAACCACAAG CAGGCGGTGC TCTACGACCC GGCGCTTAAT
GCAACATACC CGATGAATAA CGCCGACGCC AAGGGATACG GCGTCGAACT TGAAGCAGAC
TACAAGCCCT CCCGCGACCT GAAATGTTAC GGTTCATTCT CATGGAACCG ATTCTACTTC
GACCAGGCCA TCGCGTCTGA TGCCAGCGGC AACCCGACTA TTGACGTAAA GGGTGACCAG
GTTCCTGATG CACCGGAATT CATGGCCAAG GGAATGCTCA GCTACAGGAT GGGTGACGTC
AGCATCTCTC CGATTGTCCG TTACAGCTCA GTCCGTTACG GGGATGTACT ACACGAAGAA
AAGATCGACG GTGCGACGGT CTTCGATCTT GACATCACCT GGTCGCGACC GATGCTCGGA
TTCAAAAATG TCGACTGTTC GCTTTCCCTC ATCAACGTGT TCGACAAACA GTACGTCAGC
ATGATCAGCA CGTCCGACTA TAAAACGATG AAGACATCCT ACCAACCCGG AGCGCCGTTC
ACCCTTATGG CGACGCTTGC CCTCCACTAC TAG
 
Protein sequence
MAFLLAATAQ AAETAPDSTV IRFTSEEITV SGQKGDILQQ VTGSESAVLN PSQMSVYKVI 
NMMPSLSQQS VDPYGLADIS NYHEAFKFRG VEATAGGVPS TTANVEGLPV TGRPGGGATI
YDLENMQNIT IYTGVMPANK GLGLSTVGGK IDMEIKRPTD TFGVDVKQTV GSNDFSRTYL
RVDSGELGSG LKAFVSGSTS YADKWKGEGS SNRNNLMFGI SETFSDRVKL EAFLTYSKGL
IHPYRALSYA EISNLETAYS KDYSTDPTSV WHYDYNKNEF EDWMVMANLE IKTGDSSKLN
IKPYYWSDKG YYMETITPTP GTNLVREWDV EHDLKGLLAE YSTKLGDIDL DFGYLFHTQE
RPGPPSSWKN YTVSTAGDLV FKNWSILSNT SSHELHEPFI EAKYSTGNYR IEGGLKYVNY
TLPSIITYDM AAVDVSYDEA LASNPSIDAS RSATAAKTFS RVFPNLTLTR FINDDTSIHL
AYGENYVTHV DIYPYFISNA KNFITNGITF QELWDAREME TAQNFELGMK MKGTNWSLAP
TIYYAIHNHK QAVLYDPALN ATYPMNNADA KGYGVELEAD YKPSRDLKCY GSFSWNRFYF
DQAIASDASG NPTIDVKGDQ VPDAPEFMAK GMLSYRMGDV SISPIVRYSS VRYGDVLHEE
KIDGATVFDL DITWSRPMLG FKNVDCSLSL INVFDKQYVS MISTSDYKTM KTSYQPGAPF
TLMATLALHY