Gene Plut_1404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlut_1404 
Symbol 
ID3745015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium luteolum DSM 273 
KingdomBacteria 
Replicon accessionNC_007512 
Strand
Start bp1585585 
End bp1586715 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content58% 
IMG OID637769442 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_375306 
Protein GI78187263 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.2387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCC GCCTCCAGAG CACCGACCCC CGATCCGCCG CCCGGACGGG CATCCTTTCC 
ACCGGCCATG GTGATATCCC GACCCCCGTC TTCATGCCGG TCGGAACCCG GGCAAGCGTC
AAGTCGGTCG AGCCGCATGA ACTGCTTGAA CAGGAAGCGC ACATTATCCT CACGAACACC
TATCATCTCT ACCTGAAACC CGGCAACCAC ATCATAAGGA AAGCCGGAGG GGTGCACCCG
TTCATGGACT GGCATGGACC GCTGCTCACC GACAGCGGCG GCTACCAGGT CTACTCGCTC
TCAGAACTTC GCAGAATCAG TGAAGAAGGG GTAACATTCA AATCGCACCT CGACGGCAGC
ATGCTGCAGT TCACTCCTGA AAATGTCGTT GACACCCAGC GCATCATCGG CAGTGATATC
ATGATGCCCC TCGACGAATG CCCCTCATCC AAGGCGGATC GTGAGTACAT CCGCAAATCA
GGCGAACTGA CCATACGCTG GGCCGAGCGT GCGCGGCGCC ACTTCAGTGC AACTGCCCCC
CTTTACCATC ACCCGCAGAT GCTCTTCGGC ATCACCCAGG GAGGCACGCA CAGTGACCTG
CGTGCCCTGT CAGCCAAAGC GCTTGTCGAC CTCGACTTCG ACGGCTATGC CACCGGCGGC
ATGGCGGTCG GCGAACCGGC CGAAGAGATG TATCGCATCC TTGAGCTCTC CCATACGCTC
CTACCGGAAC ACAAGCCACG TTACCTGATG GGAGTCGGCA CCCCGGAAAA TATCCTCAAC
GCCATTGAGC GGGGCATCGA CATGTTCGAC TGCGTCATCC CAACCCGCGA AGGACGCAAC
GGAAGAGTCT ACACCCGAAA AGGCAAAATG AACCTCCGCT CGGCAAAATA TGCCGAAGAC
TTCTCCCCTG TTGACGAAGG GTTCGGCAAC CATGTGTGCA AACATTACAG CCGCGCCTAT
ATCCGCCATC TCCTGAACGT GGGCGAAATC CTCGGCCTCA AGCTCTGCAC CCTGCAGAAC
ATCTCGTTTT TCATGTGGCT GACCAGAACC GCCCGCCAGC GGATTGAAGA GGGATCGTTC
CTCGAGTGGA AGGCCGGGTT CCTTGAAGAG TTCAACAGAG GAGAAGCATA G
 
Protein sequence
MNFRLQSTDP RSAARTGILS TGHGDIPTPV FMPVGTRASV KSVEPHELLE QEAHIILTNT 
YHLYLKPGNH IIRKAGGVHP FMDWHGPLLT DSGGYQVYSL SELRRISEEG VTFKSHLDGS
MLQFTPENVV DTQRIIGSDI MMPLDECPSS KADREYIRKS GELTIRWAER ARRHFSATAP
LYHHPQMLFG ITQGGTHSDL RALSAKALVD LDFDGYATGG MAVGEPAEEM YRILELSHTL
LPEHKPRYLM GVGTPENILN AIERGIDMFD CVIPTREGRN GRVYTRKGKM NLRSAKYAED
FSPVDEGFGN HVCKHYSRAY IRHLLNVGEI LGLKLCTLQN ISFFMWLTRT ARQRIEEGSF
LEWKAGFLEE FNRGEA