| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_4296 |
|---|
| Symbol | |
|---|
| ID | 9122226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014149 |
|---|
| Strand | + |
|---|
| Start bp | 31603 |
|---|
| End bp | 33477 |
|---|
| Gene Length | 1875 bp |
|---|
| Protein Length | 624 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | parB-like partition protein |
|---|
| Protein accession | YP_003632302 |
|---|
| Protein GI | 296051628 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 309 |
|---|
| Plasmid unclonability p-value | 1.40492e-23 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGA CAGAGGAAGA GCTGCTCAAC CCGACTTATG TCGCCGCCCT GGCTCTCGGT
TCCATCAACG ACCGCACGAA AGGCCTTCAC TTTGAACACG GTCACTCATG GGTGACATCG
GAAGTCAACC ACGCTCTGCG AAATCTCGAA TCAATGTGTT CCCCAACCCC TGAAGAGGAA
GAGTTTTTTA TGGCCACGAA AACGAAACCA GCACCTGCCA AGCCCACCAA AGCCACGAAG
CCAGCGAAGC CGAAAGAAAC CGCTCCTGAG GTCACATCAG AGTCATCGCA GGAGCATCCC
GGCAAGGCCT TCATCGTCGA TCGCAGTCGT GACATCCCAC TCTCTCAGCT CGATCCCAGC
CCCTGGCAGG TCCGCAAGAA GACCAGCAGC GAGTGGATTG CCGAGTTAGG CCAATCGCTC
TTGGATGATG GCCAACTGGC ACCGCTGTTG GTCAGGCTGA GCAAGATAAT TAATCAAGGA
TCGCTGGCGA ATCGCTACGA AATCATTGCT GGTCATACGC GAGCCTTCGC GGCTGGTCAG
GTCGGCCTCA AATCTCTGAG GTGTGACATC CTCGAATGCG ATGACGAAAC CGCTCAGCGG
CTCGTGTTGA TCGATAACGC GAAGCGGAAA GACCTCACGA AGATTGAGCA GGCCCAGGCA
CTGAAGGCAC TGGTCGAAAC GTACGAGGCG GCCGGGAAGA GTCAGCGGCA ACTGGCCGCC
GACATCGGGA TCAGCCAGGG ACAGATCAGC AATCTGACCC GGCTGCTGCT CCTGCCGCCC
GAGGTGCAGG AGCTGGTGAT TTCTGGAGAA ATCACTCAGG CGTCCGCCCG CGAAGCAGTG
CCGATGCTGC AGCATCCAAA GATTGCCAAA GCATTTGTCG CGGAGATTGC TGACATTCGA
GATGTGGCCG TGGAGGAGGC GGAACGTCAG GGCGAGGAGG CCAGGATTGA CCTGATGAAC
TCCATCCGTT CGGTCGTTCG TGAGATTGGT CAACCTCTTG ATGGTCAAAT CTACTACAAG
GGTCGCTGGG TGAACCGGGC CTTTAAGCTG ACGCCTGAGA TTGAGGAGCA GCTCGACATT
GTTGATCTGT CGAGCAACCC GAAGGACCCT CGACGATATG CACTCAACAA AAAACTCTTT
GAGGAGCTGC AGGACAAGGC AGAAGCCAAG AAGAAGGCGG ATGAGCAGAA AGGGATCGAG
GGGAAGTGCT CAGGCAAGAA GCAGCTGACG CCGGCACAGC AGAAGGAAAA GGACAAGCAG
CAGGCTGAAC AGCTCGCAGC GAGAATCGCG AAGTGGAAGA TCAGGATCCA GAAGGACATG
GTCTGCGATT GGATTGATAC CACTGCGAGC GAGCGGGAGA TGGTCAGCGT GCTGGGATGG
CTCTGGCTGC ACTGGCAGCA CCACAGCGAG AAAAGGGTGA TCAGCGAGAG CCTGCGTGAG
GCTTTGCAAG AATCTGGCAT GAAGGACTTC AACCCTGATG AACGTGAGCT CGTTAAAGCC
CTGCTGAAGG CGGATCAACC AAAGGATGAT TTGGTTTTTC CCCAGGTGCT CCGAAGCATG
GGCCTCAAGA TTCTTCGGCG ATGTGAGGTC GCTCCATTTC GAATTGCGGA TCCTGAGATC
ATTCAGATCA TTTTCGATTA TGCCAGACTC AACATTGAGA CGGTCTGGGC CTCGGCCTAC
GGTGAGGACG TCGAGGAGTT TTTCGGGATG CATTCAACGG CTCAACTGAC GGCCCTGGCG
AAGGAGCTCA AGATCTCCGT CAGCAGCCCC AAGAAGATCG ACATGATCGA CGATCTCCTG
CAGCACTGCT GGGGTAAGCC CTGCCCGAAA TCGATCATTG ATGCCAAGGC GGCAGACGCC
AGCGGGAAGT GGTGA
|
|---|
| Protein sequence | MTKTEEELLN PTYVAALALG SINDRTKGLH FEHGHSWVTS EVNHALRNLE SMCSPTPEEE
EFFMATKTKP APAKPTKATK PAKPKETAPE VTSESSQEHP GKAFIVDRSR DIPLSQLDPS
PWQVRKKTSS EWIAELGQSL LDDGQLAPLL VRLSKIINQG SLANRYEIIA GHTRAFAAGQ
VGLKSLRCDI LECDDETAQR LVLIDNAKRK DLTKIEQAQA LKALVETYEA AGKSQRQLAA
DIGISQGQIS NLTRLLLLPP EVQELVISGE ITQASAREAV PMLQHPKIAK AFVAEIADIR
DVAVEEAERQ GEEARIDLMN SIRSVVREIG QPLDGQIYYK GRWVNRAFKL TPEIEEQLDI
VDLSSNPKDP RRYALNKKLF EELQDKAEAK KKADEQKGIE GKCSGKKQLT PAQQKEKDKQ
QAEQLAARIA KWKIRIQKDM VCDWIDTTAS EREMVSVLGW LWLHWQHHSE KRVISESLRE
ALQESGMKDF NPDERELVKA LLKADQPKDD LVFPQVLRSM GLKILRRCEV APFRIADPEI
IQIIFDYARL NIETVWASAY GEDVEEFFGM HSTAQLTALA KELKISVSSP KKIDMIDDLL
QHCWGKPCPK SIIDAKAADA SGKW
|
|---|
| |