Gene Plim_4088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4088 
Symbol 
ID9140808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp5244330 
End bp5245064 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content53% 
IMG OID 
ProductMethyltransferase type 11 
Protein accessionYP_003632098 
Protein GI296124320 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATTC TTGAACCTTA TCATCTGCAT GAATTCAGTC ATTTTGAGTT TCCACCGGCC 
AGCCGGGTTC TCGATGTGGG TTGTGGGCCG GGAGAACAGA TGCTGGAGCT GCTGAGAAGA 
GGTCACGAGC CAGTCGGCAT CGATCCCGAT CCCGCCTGTG TCGAAACAGT CCGCTCGTAT 
GAACTGGAAG CCGTCCAGGG GTTTGCCGAA CATCTCCCTT TTCCCGACAG CAGCTTTGAC 
GGCGTGATTT CGAAAGTCGT TTTGCCCTAC ACGCGTTCTG CCATCGCCAT GAAAGAGATG 
GCTCGTGTGC TTAAGCCCGG TGGCATGGCT CGCTTTTCCT TTCATGGGGC GGGCTACTTT 
TTGCTCTATG CCGCCAAGCA TCCCAACTGG AAAACCCGCA TCTACGGCTT GAGATCGTTA 
GTCAATGGCT GGAGTTACGC AGCGACCGGC AAGCGCTTGC CTGGTTTTCT CGGTGACACC 
ATCTATCAAT CGCGTACACG CCTGAACCGA TATTACCGCC GACTCGGCCT CGAATTGCTC 
GAAGATCCAC AGGCACCAAC CTTCATGGGT TTCCCCGTCT TCATCTATCA GGCAGTTCGT 
AAACGACCGC TGGCTCGACT CTCGATCTAC AGGCCACAAG TGGGCTCCTC ACAAGGCCAG 
AAGCTCACCA GCAAACCTCA AACTTCTGAC AAATTACATG AATTCACCGT GAAAGATGAA 
TTCGCCATGA AGTAA
 
Protein sequence
MSILEPYHLH EFSHFEFPPA SRVLDVGCGP GEQMLELLRR GHEPVGIDPD PACVETVRSY 
ELEAVQGFAE HLPFPDSSFD GVISKVVLPY TRSAIAMKEM ARVLKPGGMA RFSFHGAGYF 
LLYAAKHPNW KTRIYGLRSL VNGWSYAATG KRLPGFLGDT IYQSRTRLNR YYRRLGLELL 
EDPQAPTFMG FPVFIYQAVR KRPLARLSIY RPQVGSSQGQ KLTSKPQTSD KLHEFTVKDE 
FAMK