Gene Plim_4064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4064 
Symbol 
ID9140784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp5217358 
End bp5219655 
Gene Length2298 bp 
Protein Length765 aa 
Translation table11 
GC content58% 
IMG OID 
ProductPeptidoglycan glycosyltransferase 
Protein accessionYP_003632074 
Protein GI296124296 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGAATT CACTTCAATC TCAGTGGCTG GAGCCGGAGG CTCCCACATA TGGCTGGCTG 
GATCATCCCG GCCAGCGGCT GAGAGTGTTG CTACTGATCT TCCTGCTCCC CTCACTGGCA
ATTGGCTATC GCCTCGTGCA GTTGCAGGTC TATCGTCAGG CAGAGTTCAC TCACGTTTTT
GAGGCTACTA CCACTCGGAT CGTCGAGATT CCGGCTCGCA ATGGTCGTAT TCTCGCCTCA
GATGGCTCGT TACTGGCTGT CGATGAAGAG AACTTCGAAC TCTGGGTGCA CTACCGATGG
CTGGAAGAAC CGCCTCATCC GGACTGGCTC AAGCGGCAGG CGAATAGTCG GTTATCCCGG
CGGCAACGAC GTGATGACAA GCAAGTCGCT ACGATGACCA CCACGCTCCT CAACGAACGC
CGTCAATTGT GGGAACGTAT TGCCCATGTC ACGGGTGTGA CGCCGGAAGA ACTCGATCAA
GCACGCCAGA GTGTGCAGAC CCGGATCGAA CGAATGAAGC AGGCTGTGCT CGAGAAACAG
ATTCAGCAGC AGCCAGTGAC CGAACAGCCA ACACGATCAA TACAGCCAAC ACGATCAATT
GCGGAAGAAT CTTCACCACA TGCTGTGACG GCGTGGCTCG ATTGGGGCCA AAAGTTATGG
CAGGAGTTTC AGCATGAGTT AACCACGCCG CCACCTCGTG CAGAAAACGG GCCTTTGATA
TTGGCCGAAG AACTTGAACC ACAGCGAGTG CTCGATACGC TCCCCAAAGC GGCAGCCGAT
GAGATTCTGG CACACCCGGA GTTATACCCC GGGCTCGAAG TTCGCGTCCG CCATCACCGC
ACTTATCCAG CCCGGCAGGT GGCCAGCCAT TTGCTCGGTG TGCGGACTCC TTTGCGCGAA
GAAGAAGCAC TGGAACGTAC CAAACAGTGG CCACAAGGTG ATCCCCTCGA TTATCGCACG
GGAGATGCCA TAGGCCGCAG TGGCCTCGAA CTGGCTTATG ACGCTCAGTT GCGCGGCTTG
AGGGGCTTGA AACGGCTGAC ACTCGATCGA CGCGGGCAGA TTGTTGAAGA AGTCATGACG
CGCGAAGTGA GGCACGGAGC CGACCTGTAT CTGTCACTTG ATGTCGAAGT CCAGCGCACT
GCCGAAGCTC TGCTGGAACA AGCCCTCTTG CCCGATGTGA TCGATGCGCC AGGCGACTCA
TCAACGAATG ATGTGGACAA TCCCCAAAAG CCAACCCGAT TGACATCACC TCAGGGCGGA
AGTGTCGTCG TGATCGATGT CCGCACTGGC CAGGTGATTG CCGCAGCGAG TGCTCCGGGC
TATGACGCGA ATGTCCTGAC GAACCCCTCA GCCACGGAGT GGGCTCAGTT AACAGGCGAT
GTCCGGCGGC CACTCTATCA ACGCGTCACA CGCATGGCAC TGGCACCGGG TTCGACCTTT
AAGCCTCTCA CGGCAATTGC CGGTCTGGAG GCTGGCATGA AGGCGCAGTC GGCCATCGAG
TGTGCCGGGT ATCTGGATCA ACCACAGCGC GATCGCTGCC TCATCTTCCG GCATTATGGC
GTCGGCCATG GTTCGACAGA TCTCTCAGAT GCACTTTGCC AGTCATGCAA CGTTTACTTT
TTCAAGCTGG CCCGCATGCT GGGGCCCAGC CCACTGGTCG AACAAGCCCG GCAATTCGGC
TTTGGCCAAC TCACAGGAAT TGACCTCCCT TTTGAACAGG CTGGTCATCT GCCATCGCCT
CAAACGAATT CGGCCCGCGA ACCGTGGTAT CCCGGCGATA CATTAGGCCT GGCCATTGGT
CAATCGCGGC TGCAGGTGAC GCCATTGCAA ATGGCTCGCT TTATGGCGGC CATTGCCAAT
GGTGGAGAAC TCCTCACTCC CCGGCTCAAG ACCGATCAAG GCCCCCTGCT GGTGACATCA
TTCGCGGAGA CTTCTGGAGA AACCACTCGC ACGAACGTGC GAAAGCCTTC ACTCGCTCCT
CAGACGCTGA AAGAGGTTCG TCACGGGTTG TATCGAGTGG TGAATGATGC TCAAGGAACC
GCCTATAAGA CCGTGCGTCT GAAAGAAGTC GAGATCTGCG GCAAGACCGG GACTGCCGAG
GCAGGAAGTG GTGTCGCCGA TCATGCGTGG TTTGCAGGCT ATGCTCCTGC CTCTCCGCCG
CGCTATGCCA TTGTGGTGGT GCTGGAACAT GGAGGAAGCG GCGGAAAAGA GGCTGGCCCC
ATGGCACGGG AAGTCATCCG CCGTATGCAT CAACTGGGCC TGATCCCCTC AGGCAGCCTG
GCGAAGAACG AAGACTAG
 
Protein sequence
MRNSLQSQWL EPEAPTYGWL DHPGQRLRVL LLIFLLPSLA IGYRLVQLQV YRQAEFTHVF 
EATTTRIVEI PARNGRILAS DGSLLAVDEE NFELWVHYRW LEEPPHPDWL KRQANSRLSR
RQRRDDKQVA TMTTTLLNER RQLWERIAHV TGVTPEELDQ ARQSVQTRIE RMKQAVLEKQ
IQQQPVTEQP TRSIQPTRSI AEESSPHAVT AWLDWGQKLW QEFQHELTTP PPRAENGPLI
LAEELEPQRV LDTLPKAAAD EILAHPELYP GLEVRVRHHR TYPARQVASH LLGVRTPLRE
EEALERTKQW PQGDPLDYRT GDAIGRSGLE LAYDAQLRGL RGLKRLTLDR RGQIVEEVMT
REVRHGADLY LSLDVEVQRT AEALLEQALL PDVIDAPGDS STNDVDNPQK PTRLTSPQGG
SVVVIDVRTG QVIAAASAPG YDANVLTNPS ATEWAQLTGD VRRPLYQRVT RMALAPGSTF
KPLTAIAGLE AGMKAQSAIE CAGYLDQPQR DRCLIFRHYG VGHGSTDLSD ALCQSCNVYF
FKLARMLGPS PLVEQARQFG FGQLTGIDLP FEQAGHLPSP QTNSAREPWY PGDTLGLAIG
QSRLQVTPLQ MARFMAAIAN GGELLTPRLK TDQGPLLVTS FAETSGETTR TNVRKPSLAP
QTLKEVRHGL YRVVNDAQGT AYKTVRLKEV EICGKTGTAE AGSGVADHAW FAGYAPASPP
RYAIVVVLEH GGSGGKEAGP MAREVIRRMH QLGLIPSGSL AKNED