Gene Plim_3925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3925 
Symbol 
ID9140643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp5042672 
End bp5043811 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content57% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_003631935 
Protein GI296124157 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.207175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTGCTGT TTTTGCTGTC ATTGGCGAGT CTGTTTCTGG CTGGTGGGCC GGCGTTAATG 
TTTGTCATTA ACTGGATGAG ATATCGCACG CCGTCACTTT CGATGGAGCC GTTACCACCA
GTTTCGATCC TCATTCCGGC ACGGAACGAA GAGCGATCGA TTGGCCGGGT GCTGGAAAGT
GCTCTGCAGA CCAGGGGTAT CGAATTCGAA GTCATTGTCC TGGATGATGC CTCGACCGAT
CGGACCGCTG AAATTGTGCG GGAATTCAGC CAGCAGGATC CCCGGGTCCG GCTGGAGTCG
GCACCCCCTT TACCTTCAGG CTGGTGTGGC AAACAGCACG CCTGCTGGGC ACTTTCTCAA
CGTGCCCGCT ATGACCTGTT TCTGTTCATC GATGCGGATG TCTCGCTCGA ACCCACAGGT
GCTGCTCGGT CAGTGAGCTT TCTGCAGCAG ACGCAGGTTG ATCTGGTGAG TGGTGTACCG
CGGCAGGAGT TTTCGGGGTT TCTCGATCGG CTGCTGATTC CCCTCATCCA TTTTGTGCTG
CTGGGCTTTC TGCCGATGGG TCGCATGCGG AAGACGACTG ACCCGTCTGT GGGAGCCGCC
TGTGGCCAGT TGATCCTTTC GACCAGATCG GGTTACGAGA AAACATCTGG TCATGAGCAG
GTGAAACAGT CCTTGCATGA TGGACTCGAA TTACCCCGGC TGTACCGTCG TCATGGCTTG
AGAACCGATC TCTTCGATGC GACATCGACA GCGGTGTGCC GCATGTACCA CTCGGAATAC
GAGACCTGGA AGGGATTGGA AAAGAACGCC ACGGCGGGTC TGGGGTCTCC GGCTTTGATT
GTGCCGACGA CGATCATCTT GAGTATGGGA CAGATTCTGC CTTCGCTGTG GGTGATTCTC
GCCATGCAAT GTGACTGCAC CTGGACGCTC GTGGTCGCGG CAGCGAGTCT CTTCTGTGCC
TGGCTTCCGC GCACACTGGC ACTGGTGAGC TATCGTCAAA GTCTTCTGGG TTGGGTACTG
CATCCGCTCT CCGTGCTGAT CTTCCTGGCT ATTCAATGGT CGGCCATGGT GCGAAAACTG
CGCGGGCTCC CTTCGGTCTG GAAGTCACGA GACTACGTCC AGGGTGCGAT GGTGAAGTAG
 
Protein sequence
MLLFLLSLAS LFLAGGPALM FVINWMRYRT PSLSMEPLPP VSILIPARNE ERSIGRVLES 
ALQTRGIEFE VIVLDDASTD RTAEIVREFS QQDPRVRLES APPLPSGWCG KQHACWALSQ
RARYDLFLFI DADVSLEPTG AARSVSFLQQ TQVDLVSGVP RQEFSGFLDR LLIPLIHFVL
LGFLPMGRMR KTTDPSVGAA CGQLILSTRS GYEKTSGHEQ VKQSLHDGLE LPRLYRRHGL
RTDLFDATST AVCRMYHSEY ETWKGLEKNA TAGLGSPALI VPTTIILSMG QILPSLWVIL
AMQCDCTWTL VVAAASLFCA WLPRTLALVS YRQSLLGWVL HPLSVLIFLA IQWSAMVRKL
RGLPSVWKSR DYVQGAMVK