Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3921 |
Symbol | |
ID | 9140639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 5035286 |
End bp | 5038579 |
Gene Length | 3294 bp |
Protein Length | 1097 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | protein of unknown function DUF1549 |
Protein accession | YP_003631931 |
Protein GI | 296124153 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCAGC CTCTTCCCAC CACCTGCCAA TTCGCCTGGT GTTTCAAGTC AATTGTGATC TTCGGCGTGT CGCTCGCATG GCTCTATGGC AGCCCGGCGA CAAGCGCTGG TGAGGCACCC ACTTTTCCGC AAGAGCAGAT CGAGTTTTTC GAAAAGAAGA TCCGCCCCAT CCTGGTCGAG AACTGCCACA GTTGCCATGG AGCCAGTCAG CAGAAAGCTG GCTTGAGGCT CGATTCTCGC GACGCGATCT TGCGAGGCGG TGAATCGGGG GCTTCCGCAG TCGCTCAAAA GCCCACGGAA AGCCTGCTCA TCGAGGCCAT TCAATACGAA GCCGATGGTT ATCAGATGCC TCCCAAAGGG AAGCTTCCCG CAGAAGCCAT TGCCGATCTG ACTCGCTGGG TGGAGCTGGG AATGCCGTGG CCCGCTGGCG ATGTTCCTGC CGAAAAAGGC ACGGCAGCCG AGTTCAATTT TGAAGAGCGA GCGAAGCACT GGTCGTTCCA ACCAATCACC AGACCGCAAG TCCCTCAGGT TCAAGAGGCT GGCTGGGCTC ACAATCCCAT CGATCAGTTT GTGCTCTCCA AGCTGGAATC GGCCCAGTTG TCACATGCTC CTCAGGCCGC ACCGCTGGCT CGTTTGAGGC GTTTGGCCAT CGATCTCACG GGGCTGCCAC CCACTGCCCA GGAAATCGCC GAGTTCCAGG CCGACGTTCG CCCGGATGCC TGGCAGCATT GGGTGAATCA TTATCTGAAT TCACCTCACT ACGGCGAACG CTTTGCCCGG CACTGGATGG ATCTGACACG TTATGCCGAG ACGCACGGCC ACGAGTTCGA CTACGAAATC CCCTATGCCT GGCCTTATCG TGATTATCTG ATTCGAGCCT TCAATACCGA TGTCCCTTAC AACCAGTTTG TCGCCGAACA TGTTGCGGGC GACCTTCTGC CGCAACCACG ACTTGATCCC GCCACAGGTT TGAATGAATC CATCTGCGGA ACGGCCTTCT GGTGGTTGTC TCAAGGCAAG CATTCGCCGG TCGATATCCG TTCGGAAGAG TGCGATACGG TCGACAATCA ACTCGATGTC TTCAGCAAGA CATTTCTGGG AATGACGGTG GCCTGTGCAC GCTGCCATGA TCACAAGTTT GACCCTATCC GGATTCGCGA TTACTACGCA CTCGCGGGGT ATCTGCAAAG CAGCCGGCGG GATGTCGCGA ATCGAGTTCC GGTCAGCACT TATGAGGCGA TGATCACTGA TGCCGCCCGG CATCACGATG GACGATGGAA AGCGATCCTG GAGATTCAGC CGGAATTGTT CAATCAGCCG GCCAGGTGGT TGAGCGCGAT GACGACTCGC CATCAGAAGC GGATAATGGC CCATCCGACG GACTGGCTCT CGGCCTGGCT GCAGCTGGGA TTTCTTACGA ACAAAGACGA ATTTGCCGCA AAAAAACAGA GCATGGCCCG TACCCTCAAA ATTCAACAAG AGCAGGCGGA GGCGGCTCGT AAAGCTGCCA CAATTCTGGC TGATTTTGAG CCGGGAACTT ACAACGACTG GATCACAACC GGAGCAGCGT TTTCGTTGAA TGAAAACTCA CTCCTGATTG ATGACGGGCG GCCCGGTGAA GGGGAAGTTT CGCTTCAGGA GGCAGGGACG GCTCACTCCG GTGCAGTTTC TCGAAAGCTG ATTGGGTCAC TCAGTTCACC CACTTTTGAA CTTAAGCATC GTTATCTGGA TCTTCGAGTC GCCCGGCTGG GCGGGCCGCC ACAACCCGGC AGGCAGATCA AAAATGGGCA AGTCCATGTC ATTATGGATG GCTTTCAACT CATTAAAGAC CCGCTCTATG GATCGTTCAC CTTGAATGTT CCCAACGACG GTCAATGGCG GTGGTTTCGG CTGGATCTCT CCCGGGCGAT GGGGAGCAAG ATCTATCTCG AAATTGTCGA TGAAGCTGCC GATGGCTGGA TCGCTGTTGA TGAAGTCCGA GTGACTGATG GCCCGCGAGC TGTTGACGAT GTACCGGCCA TGATGTTGGA TTGGCTCAAT GATCCAGCGA TTGTCGAACC CGAGCAACTG GCGGCTAAAT ATGCCGCATG GTGGCAAAGT GGTGGTGGTC AAGAGAAAGA CGAATTTCCT TCGATCCCAT TCGCGCAGGC TTTGCGTGAT CTCTGGCAAG CGGGCGTCCA GAATGAGCAA CTCTTTCCAG AAGGATCTGC CTGGAAATTG AAGCGGCAGC AAGTCGAGCA GCAGCAGGCC CGCTGGCAGG CGGCGATGAG CCAACTTCCC GAGCCCGAGT TTGTTCTCGC TATGGCCGAT GGTACCGCAG AAGATGATCA TGTCCTGCTG CGGGGAAATC ACAAGAAGCC CGGCCCTGTC GAGCCTCGTC GACCACTGGA AGTTCTGGGT GGACTGAAGA TCAAGGCACC TGATCACGGG AGTGGGCGGC TCGAACTCGT TGAGAATCTG GTGAGCCCTG ACAACCCGCT GGTGGCGCGA GTCATCGTGA ATCGACTGTG GCATTACCAC TTCGGGCGAG GATTGGTTCC GACGCCGGAT GACTTCGGCA AGATGGGGCA ACCCCCTTCG CATCCTGAAC TGCTCGATTG GCTCGCCAGT GAACTGATTC AGTCGGGCTG GTCACTGAAG CATATTCACC GCCTGATTCT GAATTCGGCG ACATGGCAGC AATCGAGCGA TCTGGCCATC GGTGAAGTCG AGGCGAAAGA TCCACAGAAC ATTCTGCTGC ATCGGATGAA TCCCCGGCGA CTCGAAGCGG AAGCTGTGCG GGATTCGATT CTGGCTTTTT CAGGCCGCCT CAACAGGACG ATGTATGGCC CACCCATCCC GCTTCATTTG ACCCCATTTA TGGAAGGTCG GGGGCGTCCA GGGCAATCTG GCCCACTCGA TGGCGATGGT CGGCGAAGTT TGTATTTGAG TGTGCGGCGA AACTTTTTGA ACCCGGTCTT TCTGGCTTTC GATTTCCCGA CGCCATTCAC CACCATGGGA AGACGCTCCA CCAGTAATGT TCCTGCTCAG GCACTCGTGC TGCTCAATAA TCCTTTGATT CTTGCTGAAG CCGATCGAGC GGCCCAGCAG ACGAAAACAC TTGAGCCCGC CTCAAGGGTC GAAGCCTTGT GGCTCGCCGC CTATGGTCGC CCGCCAACCT CAGCCGAATC CCGCGAGGCA ATCGAATTCG TCGATGAACA GACGAAAGAG TACGGCGGCA ACGACCCATC CCCCGCCTGG CGCGACCTCG CCCATGTGCT GCTCAACAGT AAAGAGTTTT CGTTTGTGCC GTAG
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Protein sequence | MPQPLPTTCQ FAWCFKSIVI FGVSLAWLYG SPATSAGEAP TFPQEQIEFF EKKIRPILVE NCHSCHGASQ QKAGLRLDSR DAILRGGESG ASAVAQKPTE SLLIEAIQYE ADGYQMPPKG KLPAEAIADL TRWVELGMPW PAGDVPAEKG TAAEFNFEER AKHWSFQPIT RPQVPQVQEA GWAHNPIDQF VLSKLESAQL SHAPQAAPLA RLRRLAIDLT GLPPTAQEIA EFQADVRPDA WQHWVNHYLN SPHYGERFAR HWMDLTRYAE THGHEFDYEI PYAWPYRDYL IRAFNTDVPY NQFVAEHVAG DLLPQPRLDP ATGLNESICG TAFWWLSQGK HSPVDIRSEE CDTVDNQLDV FSKTFLGMTV ACARCHDHKF DPIRIRDYYA LAGYLQSSRR DVANRVPVST YEAMITDAAR HHDGRWKAIL EIQPELFNQP ARWLSAMTTR HQKRIMAHPT DWLSAWLQLG FLTNKDEFAA KKQSMARTLK IQQEQAEAAR KAATILADFE PGTYNDWITT GAAFSLNENS LLIDDGRPGE GEVSLQEAGT AHSGAVSRKL IGSLSSPTFE LKHRYLDLRV ARLGGPPQPG RQIKNGQVHV IMDGFQLIKD PLYGSFTLNV PNDGQWRWFR LDLSRAMGSK IYLEIVDEAA DGWIAVDEVR VTDGPRAVDD VPAMMLDWLN DPAIVEPEQL AAKYAAWWQS GGGQEKDEFP SIPFAQALRD LWQAGVQNEQ LFPEGSAWKL KRQQVEQQQA RWQAAMSQLP EPEFVLAMAD GTAEDDHVLL RGNHKKPGPV EPRRPLEVLG GLKIKAPDHG SGRLELVENL VSPDNPLVAR VIVNRLWHYH FGRGLVPTPD DFGKMGQPPS HPELLDWLAS ELIQSGWSLK HIHRLILNSA TWQQSSDLAI GEVEAKDPQN ILLHRMNPRR LEAEAVRDSI LAFSGRLNRT MYGPPIPLHL TPFMEGRGRP GQSGPLDGDG RRSLYLSVRR NFLNPVFLAF DFPTPFTTMG RRSTSNVPAQ ALVLLNNPLI LAEADRAAQQ TKTLEPASRV EALWLAAYGR PPTSAESREA IEFVDEQTKE YGGNDPSPAW RDLAHVLLNS KEFSFVP
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