| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3822 |
|---|
| Symbol | |
|---|
| ID | 9140540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 4913793 |
|---|
| End bp | 4914761 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | ATP-binding region ATPase domain protein |
|---|
| Protein accession | YP_003631833 |
|---|
| Protein GI | 296124055 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.216218 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCCC TCTTTCGAAA ACGTCGCACG CTGCACCTGC CGATTACACT CAGCGTGACT
CTGATCGTGC TGAACGTAAC TTTAATGGTT GTATGGATTG TGCTGTTCGC CCAGAACACA
TGGTGGGCAG CACTCGTGCT GGGCGTGGTG GTTTTCACGC TGATACTCAC CGGCCTTTCC
ATCTACATGG TGCTCATGAT CAAAGAAGTC AGGCTCAATC AAAGGCAGGC CAATTTTGTC
GATGCCGTCA CTCATGAACT GAAATCACCC ATTGCTTCAC TCAGTCTGCA TCTGGAAACC
TTGAGTCTGC GCAGTCTTTC CGATGATCAG AGGCAGAAGT TTTATGCCAC CATGGAACGC
GAACTCGAGC GACTGGATCA TCTCATTACA CAACTGCTCG ATGTCGGACG GCTCAATGCG
ACGGGGACTC AGGCCGCTTC CACCGACTTG ATTCTCGATA CACTTTTACG ATCTGTCGCT
CATGAGGTGG CAGGGCATTA CCGCAAAGAA GTCACGGAGA TTTTCCAATT TGATCTTGAT
ACAGCAGTCC TTCGAGCACC TCAAATTGTC GTAGAAACCA TATTTCGGAA TCTCTTCGAC
AATGCCATCA AGTATGGTGG ACATCCTCCG CTGATCTTTG TCGAAGTTCG TGCGGTGGAT
CATGCCCGGA TCGTGATCCG CGTGACCGAC AACGGAGCGG GCGTCGCCCC CGAAGATCGC
AAGCGGATTT TTCAAATGTT CTACCGTGCG GGTAACGAAC TGCAGAGACG AACCAAAGGG
ACAGGGCTGG GTCTGTATAT TGTTCAGACA TTAGTCCGGC AGTTGAATGG AAGAATTCAC
GTTCACCCAG TCAATAATCA CTCTTGGAGC CTTTCCAGTG TGCGTTCCGG GCTGAAAGAT
CTGGAAGGCA AACCTCTGGA AACGGGCACC ACCTTCGAAT TGATCCTTCC AGGACGGGTC
ATCATATGA
|
|---|
| Protein sequence | MSALFRKRRT LHLPITLSVT LIVLNVTLMV VWIVLFAQNT WWAALVLGVV VFTLILTGLS
IYMVLMIKEV RLNQRQANFV DAVTHELKSP IASLSLHLET LSLRSLSDDQ RQKFYATMER
ELERLDHLIT QLLDVGRLNA TGTQAASTDL ILDTLLRSVA HEVAGHYRKE VTEIFQFDLD
TAVLRAPQIV VETIFRNLFD NAIKYGGHPP LIFVEVRAVD HARIVIRVTD NGAGVAPEDR
KRIFQMFYRA GNELQRRTKG TGLGLYIVQT LVRQLNGRIH VHPVNNHSWS LSSVRSGLKD
LEGKPLETGT TFELILPGRV II
|
|---|
| |