Gene Plim_3645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3645 
Symbol 
ID9140363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4686916 
End bp4687347 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content52% 
IMG OID 
Producthelix-turn-helix domain protein 
Protein accessionYP_003631656 
Protein GI296123878 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATCC ATTCACAGTT TCGTCTCAGA GGGAAGAACA AAGATTCTTA TCTGGAGCTG 
ATTCTGGATT TTCCCCTGGC TTCGATCCGA AGTGATGCAC ATCTGGTTGA AGCACAAAAA
GTGATCGATG GCCTCTTGGC CCGCGAACGT CTTAACGAGG GTGAAGCGAC TTACCTCGAC
GCACTGAGTG ATCTTGTGGA GACCTACGAA GACGAGCATC ATGCCATCGC TCCTGCTACT
GATGCCGATC TGCTCCAGCA GCTTCTTGAG GCGAAAGGAT TATCTCAGGC ACAGCTCAGT
CGAGAAGCGG GTCTGCCCAG ATCAACGATC TCCGAAGTGC TCAAAGGGAA AAGACGATTC
AGCCGACAGA TGATCCACAA GCTGGCCGCC TACTTTCAGA TCGACGCTGC CGTGCTGGCG
GTTAACATCT AG
 
Protein sequence
MTIHSQFRLR GKNKDSYLEL ILDFPLASIR SDAHLVEAQK VIDGLLARER LNEGEATYLD 
ALSDLVETYE DEHHAIAPAT DADLLQQLLE AKGLSQAQLS REAGLPRSTI SEVLKGKRRF
SRQMIHKLAA YFQIDAAVLA VNI