Gene Plim_3613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3613 
Symbol 
ID9140331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp4647090 
End bp4647776 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content58% 
IMG OID 
ProductNERD domain protein 
Protein accessionYP_003631624 
Protein GI296123846 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.646238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCATC TCCGAGGTTG GTTTGGCGAA ATCTGCACCC GGCTGGGCCT GTGGCTCAGG 
CTCCCTTCGC GAACCTACCG CCAGTTCCAC AACGTCGTCG TCCCCACCTC CAACGGCACG 
ACACAGATCG ATCACCTGAT CGTTTCAACT TACGGCCTCT TCGTCATTGA AACCAAGACC 
ATGAATGGCT GGATCTATGG CAACGAGCAA GACAGCCAGT GGACGCAGAA GTTCTATAAA 
AAATCGTTCC GCTTCCAGAA CCCGCTCAAG CAGAACTATC GGCATCTCTG CTGCCTCGAA 
GAGCACCTGG GCCTGCCCCG AACCTGCATG CACTCGATTA TCTTCTTCAT CGGCGACGCG 
GAACTGAAGA CCCCCATGCC CAGCAACGTC CTCACTCACG GCCTGTCGAG CTATATCCGC 
TGGCATCGCG AGCCATTATT ATCTGAAGAC GAAGTGGAGC GGATCATCGC CGCCATCCAG 
GAACTGAAAC GCGATCGCAC TCTCAACCAC GCCACCCACA TGGCCTCACT CGCAGACCGC 
CACTCCTCAA CCACCCGCTG CCCCAAATGC GGCAACGATC TCATCGAGCG GCAATCCCAA 
CGCGGCCCGA ATGCCGGCAA CACCTTCCTC GGCTGCAAAT CCTACCCCCG CTGCCGCTTC 
ACCAGACAAC TCTCCCAAGA GCCATAA
 
Protein sequence
MSHLRGWFGE ICTRLGLWLR LPSRTYRQFH NVVVPTSNGT TQIDHLIVST YGLFVIETKT 
MNGWIYGNEQ DSQWTQKFYK KSFRFQNPLK QNYRHLCCLE EHLGLPRTCM HSIIFFIGDA 
ELKTPMPSNV LTHGLSSYIR WHREPLLSED EVERIIAAIQ ELKRDRTLNH ATHMASLADR 
HSSTTRCPKC GNDLIERQSQ RGPNAGNTFL GCKSYPRCRF TRQLSQEP