Gene Plim_3527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3527 
Symbol 
ID9140245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4555249 
End bp4555680 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content54% 
IMG OID 
Productlarge conductance mechanosensitive channel protein 
Protein accessionYP_003631539 
Protein GI296123761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCTCA TCCACGAATT CAAAGAGTTT GCCATGCGTG GCAATGTGAT CGATATGGCT 
GTGGGGATCG TCACGGGAGC GGCCTTTACC AGTATTGTCA CTTCGCTGGT GAAGAACATT
ATCACACCGC CGATTGGAGC GCTGCTCAAA GGGGCGGACT TCAGCAAGCT TTCAATCAAC
ATTCCCGTTC CTGCAGTGGC AGCCGGGGAA GTGGCTTATG TCCCGATCAG CTATGGGCTG
TTCCTGCAAT CTGTGTTTGA TTTCGTGATC ATCGCCATGG TGCTGTTTAT GGTGCTCAAG
GGGATCAATA CGCTGAAACG CAAGCAGGCC GCCGAAGAGG CGGCACCACC CGTCCCGACC
CGCGATCAGG AACTGCTGAT GGAAATCCGC GACCTGCTCA AAGCCCAGTC GAGCACAAGA
GAGAACGAAT AA
 
Protein sequence
MGLIHEFKEF AMRGNVIDMA VGIVTGAAFT SIVTSLVKNI ITPPIGALLK GADFSKLSIN 
IPVPAVAAGE VAYVPISYGL FLQSVFDFVI IAMVLFMVLK GINTLKRKQA AEEAAPPVPT
RDQELLMEIR DLLKAQSSTR ENE